PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019790.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 636aa MW: 71107.8 Da PI: 6.4505

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019790.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53	6.2e-17	335	430	1	94
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k+l++sdv+ +gr+++pkk ae++ +++++e+++lt++d s + We+k++y +++s++yv++ + Fv++++L++gD + ++ ++++++ + PCP019790.1 335 FNKELKNSDVGPLGRIIVPKKEAENNlpMLSEKEGIQLTVRDvHSDQHWEFKYKYwsNNRSRMYVFE-YTGAFVRQKRLEAGDCIYLY--EDECKNIY 429 889******************9998889999*****5556***99877777778888.99*************999..55777665 PP E CS B3 94 v 94 + PCP019790.1 430 I 430 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MEFPSRCDYH SYSVANSDGL KSSFDSRLGI EEMTSKQDME SNCEVEVVQW TTKMKTQVPL 60 SSSGEALICN VGLQSVSYGV CGQSTSTSCS WDAGFRERKG VSLESERGKG ARKCRLAEGN 120 DYGYSKTTSL RPLVIRSSPR QTFHNTANTM ENFHPPSVPS TTTVTSTHQT NNSQSSTCEP 180 MSCLPSTTYS PSATQYRYYP ALLYARNYYP YYQAGLPMYP FLGGAQPNMI LSREQASLDR 240 SRWILDALMS KSARNERKMA RQRSLSLSRN AANTAVSSTC SPPVSRHPPF HGNHDDDTCG 300 IISTSSSGNG ADLQNPKEQL YPFCTPDNKK LRLLFNKELK NSDVGPLGRI IVPKKEAENN 360 LPMLSEKEGI QLTVRDVHSD QHWEFKYKYW SNNRSRMYVF EYTGAFVRQK RLEAGDCIYL 420 YEDECKNIYI YVEKVPRPAR VAEPSSSQQR NTTTNHTDQT ANINTSLEAN NTDNRKTNTN 480 LKADNTNDKT PNTDAKTHRS NPYVASNLFS PSPSPSPFTY VAGYEEDELS LELLMEQLKQ 540 EQEANVFADA LSVISASSSA YMEHEEATTL SNNIADCRME TSTKPPSTSS AGIDPSSSSS 600 SQSRAMVRMV NDDQPEFDDC YKGLGTLPEV DHYKYM

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MEFPSRCDYH SYSVANSDGL KSSFDSRLGI EEMTSKQDME SNCEVEVVQW TTKMKTQVPL  60
SSSGEALICN VGLQSVSYGV CGQSTSTSCS WDAGFRERKG VSLESERGKG ARKCRLAEGN  120
DYGYSKTTSL RPLVIRSSPR QTFHNTANTM ENFHPPSVPS TTTVTSTHQT NNSQSSTCEP  180
MSCLPSTTYS PSATQYRYYP ALLYARNYYP YYQAGLPMYP FLGGAQPNMI LSREQASLDR  240
SRWILDALMS KSARNERKMA RQRSLSLSRN AANTAVSSTC SPPVSRHPPF HGNHDDDTCG  300
IISTSSSGNG ADLQNPKEQL YPFCTPDNKK LRLLFNKELK NSDVGPLGRI IVPKKEAENN  360
LPMLSEKEGI QLTVRDVHSD QHWEFKYKYW SNNRSRMYVF EYTGAFVRQK RLEAGDCIYL  420
YEDECKNIYI YVEKVPRPAR VAEPSSSQQR NTTTNHTDQT ANINTSLEAN NTDNRKTNTN  480
LKADNTNDKT PNTDAKTHRS NPYVASNLFS PSPSPSPFTY VAGYEEDELS LELLMEQLKQ  540
EQEANVFADA LSVISASSSA YMEHEEATTL SNNIADCRME TSTKPPSTSS AGIDPSSSSS  600
SQSRAMVRMV NDDQPEFDDC YKGLGTLPEV DHYKYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	9e-41	B3 family protein