PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP019688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 248aa MW: 27626.2 Da PI: 10.0478 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.1 | 1.2e-16 | 11 | 98 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ffk l ++ + +++p +f + + +++++ k+ ++e+ + sWev + r + g+ ++++GW+eFvk+++Lk+g+f+vF++ gr+ f +v v+ PCP019688.1 11 FFKPL--IPGFEYA-ISIPASFSQ-N-LNERNAKKAVIESCQ-GSWEVGV-ARTGEGTLYFEGGWEEFVKDHNLKVGEFLVFRHLGRMVF--HVNVY 98 55666..4456665.99*****84.4.445566677777755.59*****.35555559***************************9999..66664 PP | |||||||
2 | B3 | 36.6 | 7.9e-12 | 135 | 219 | 10 | 87 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE...EEETTE..EEE-.......TTHHHHHHHHT--TT-EEEEEE-SS CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkl.iyrkksgr..yvlt.......kGWkeFvkangLkegDfvvFkldgr 87 +++ +++p f+++hg+ ++ +++l+ + +W v+l ++++++++ + + +GW +F ++ngLk gD + F l++ PCP019688.1 135 LPSKCYVTIPSGFVKAHGLGDRK--KMILKVPFVrGKWPVELgTWQGGKRGaaI--SlrtairtRGWYKFYEDNGLKIGDCCKFVLKEV 219 3456999**********888555..677777544379*****556555555563..33355666********************98754 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence |
MAGSPPFPRR FFKPLIPGFE YAISIPASFS QNLNERNAKK AVIESCQGSW EVGVARTGEG 60 TLYFEGGWEE FVKDHNLKVG EFLVFRHLGR MVFHVNVYEP LGCEKVFPPP PPPAAAPSTS 120 SPLFFLKSIS ETHSLPSKCY VTIPSGFVKA HGLGDRKKMI LKVPFVRGKW PVELGTWQGG 180 KRGAAISLRT AIRTRGWYKF YEDNGLKIGD CCKFVLKEVP DSKSKPVIME VDIKRMVLGS 240 SKAVVNFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31690.1 | 2e-24 | B3 family protein |