PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019687.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 438aa MW: 48865.2 Da PI: 6.5089

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019687.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	1e-07	384	417	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + PCP019687.1 384 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 417 469*****************************87 PP
2	ELK	29.9	1.2e-10	338	359	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PCP019687.1 338 ELKHELKQGYKEKIVDIREEIM 359 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MAYHNHLSQP LHHFTDQTQQ QHQQYQSDQT DPTSKPPEPH HPFQPAPNWL HSALLRNFTN 60 ADTNPTNTNN ANNHGGGSSN FLNLHVTASD SVASQASNQW LSQSHRPILH RNHSDVIDDV 120 TVAGDSMIAA MSHDSADLKP DSNLNKSDGG VVESGIPGGG GGGDGGVINW QNARHKAEIL 180 AHPLYEPLLS AHVACLRIAT PVDQLPRIDA QLAQSQNVVA KYSALGNGMV GDDKELDQFM 240 RHYVLLLCSF KEQLQQHVRV HAMEAVMACW EIEQSLQSLT GVSPGEGTGA TMSDDEDDQV 300 DSDANLFDGS MEGHDSMGFG PLVPTESERS LMERVRQELK HELKQGYKEK IVDIREEIMR 360 KRRAGKLPGD TTSVLKAWWQ SHSKWPYPTE EDKARLVQET GLQLKQINNW FINQRKRNWH 420 SNPSTSTVLK SKRKRYTN

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MAYHNHLSQP LHHFTDQTQQ QHQQYQSDQT DPTSKPPEPH HPFQPAPNWL HSALLRNFTN  60
ADTNPTNTNN ANNHGGGSSN FLNLHVTASD SVASQASNQW LSQSHRPILH RNHSDVIDDV  120
TVAGDSMIAA MSHDSADLKP DSNLNKSDGG VVESGIPGGG GGGDGGVINW QNARHKAEIL  180
AHPLYEPLLS AHVACLRIAT PVDQLPRIDA QLAQSQNVVA KYSALGNGMV GDDKELDQFM  240
RHYVLLLCSF KEQLQQHVRV HAMEAVMACW EIEQSLQSLT GVSPGEGTGA TMSDDEDDQV  300
DSDANLFDGS MEGHDSMGFG PLVPTESERS LMERVRQELK HELKQGYKEK IVDIREEIMR  360
KRRAGKLPGD TTSVLKAWWQ SHSKWPYPTE EDKARLVQET GLQLKQINNW FINQRKRNWH  420
SNPSTSTVLK SKRKRYTN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	415	435	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein