PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019652.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 383aa MW: 42162.8 Da PI: 8.0829

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019652.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6e-32	260	313	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PCP019652.1 260 PRMRWTSTLHARFVHAVEFLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 313 9****************************************************7 PP
2	Myb_DNA-binding	45	2.5e-14	261	312	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ PCP019652.1 261 RMRWTSTLHARFVHAVEFLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 312 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MPLEGIFIEP SSATTTTSSC PIPDLSLQIS PPNTSSNSSS IFNTTISETQ NPTTSNSQAH 60 TELSLGRCFT GGAHEQEPPQ NPYQQQSFHL HRSNSHLSHL NHGVSLLDVS SSEGLRPIKG 120 IPVYHQNRSF PFLPMDNMIT RDHHKDSRMC FYPKPPPPSS YNHPSFPSAA SCSPNTPSAP 180 YFGGGGAGGF DPMSRFTGFS PVDVFKSNNQ LHHHHHLHQL HHHNQYGIGG VGPMSEGSHH 240 GIMRSRFLPK LPTKRSMRAP RMRWTSTLHA RFVHAVEFLG GHERATPKSV LELMDVKDLT 300 LAHVKSHLQM YRTVKTTDKP AASSGQSDGS GEDDILSPIC SATDQHAVRN TQQFPEQRGP 360 SDRSVQPEAD YTSSTTLWSN SSR

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MPLEGIFIEP SSATTTTSSC PIPDLSLQIS PPNTSSNSSS IFNTTISETQ NPTTSNSQAH  60
TELSLGRCFT GGAHEQEPPQ NPYQQQSFHL HRSNSHLSHL NHGVSLLDVS SSEGLRPIKG  120
IPVYHQNRSF PFLPMDNMIT RDHHKDSRMC FYPKPPPPSS YNHPSFPSAA SCSPNTPSAP  180
YFGGGGAGGF DPMSRFTGFS PVDVFKSNNQ LHHHHHLHQL HHHNQYGIGG VGPMSEGSHH  240
GIMRSRFLPK LPTKRSMRAP RMRWTSTLHA RFVHAVEFLG GHERATPKSV LELMDVKDLT  300
LAHVKSHLQM YRTVKTTDKP AASSGQSDGS GEDDILSPIC SATDQHAVRN TQQFPEQRGP  360
SDRSVQPEAD YTSSTTLWSN SSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	6e-51	G2-like family protein