PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019649.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 584aa    MW: 63837.8 Da    PI: 4.7584
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019649.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4549.7e-1392185781374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv++L++cAeav++++l+la+al++++  la+++  +m+++a+yf+eALa+r++r    +y    p++  +++ s+ l +   f+e++P+lkf+h+ta
  PCP019649.1 218 LVHTLMACAEAVQQENLKLADALVKHVGLLAASQTGAMRKVATYFAEALARRIYR----IY----PQDCLDSSYSDILEM--HFYETCPYLKFAHFTA 305
                  689****************************************************....44....444443335555544..5*************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  NqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l+dl++++L++
  PCP019649.1 306 NQAILEAFATARRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLTPSMLDI 403
                  ************************************************************************************************** PP

         GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +p   E++aVn+v++lhrll++++++++    vL+ +k ++Pk+v++veqea+hn++ Fl+rf+eal+yys lfdsle +  +  +++ ++++++lgr
  PCP019649.1 404 RPseVEVVAVNSVFELHRLLARPGAVDK----VLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGS--SGPSQDLVMSEVYLGR 495
                  **88899*************99999988....*********************************************999..566999********** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +i+nv aceg +r+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
  PCP019649.1 496 QICNVMACEGGDRVERHETLSQWRGRMDSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENNGSLMLGWHTRPLIATSAWQ 578
                  **********************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    
MKRDHRESCA TVTARQNNSK PEYSSPPSSA LNGKAKIWED DQDGYSAGGD MDELLAVLGY  60
KVRSDDMADV AEKLEQLEMV MGSAQEDGIS QLSDTVHYNP SDLSGWVQSM LSELNTGDDM  120
PSIDDPLLVP AQSSSITSMS FSNSQRSRVF SDDSEYDLRA IPGVAAYPPA YSPSDTESTR  180
KRLKASIGSD SNGSSSGAVS DPTRPRVLVD SQETGVRLVH TLMACAEAVQ QENLKLADAL  240
VKHVGLLAAS QTGAMRKVAT YFAEALARRI YRIYPQDCLD SSYSDILEMH FYETCPYLKF  300
AHFTANQAIL EAFATARRVH VIDFGLKQGM QWPALMQALA LRPGGPPAFR LTGIGPPQPD  360
NTDALQQVGW KLAQLAETIG VEFEFRGFVA NSLADLTPSM LDIRPSEVEV VAVNSVFELH  420
RLLARPGAVD KVLSSIKAMK PKIVTIVEQE ANHNGPVFLD RFTEALHYYS NLFDSLEGSS  480
GPSQDLVMSE VYLGRQICNV MACEGGDRVE RHETLSQWRG RMDSAGFDPV HLGSNAFKQA  540
SMLLALFAGG DGYRVEENNG SLMLGWHTRP LIATSAWQLA STTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.10.0GRAS family protein