PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019575.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 352aa MW: 40058.4 Da PI: 4.9198

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019575.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.5	5.9e-35	46	137	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+ + ++sws+ g sfvv+d+++f ++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ik PCP019575.1 46 FLNKTYDMVDDSGSNGVVSWSRGGASFVVWDPHTFVMSLLPKYFKHNNFSSFVRQLNTYGFRKVDPNR---------WEFANEGFVRGQKHLLKNIK 133 9*************************************************************9998.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PCP019575.1 134 RRKA 137 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MNYLYPVKEE YPGSSSSQPG PGFDQMVMTI PPQPMEGLND MGPPPFLNKT YDMVDDSGSN 60 GVVSWSRGGA SFVVWDPHTF VMSLLPKYFK HNNFSSFVRQ LNTYGFRKVD PNRWEFANEG 120 FVRGQKHLLK NIKRRKAPSQ PFPAQQAVGP CMELGHFGID GEVDRLRHDK QVLMMELVKL 180 RQQQQSTRAY LQAMEQRLQG TELKQQQMMS FLARAMQNPA FIQQLVQQKE KKKELEEAMT 240 KKRRRPIDQG LSGVGGGKSN QVKREPPEFG DCEYEMSELE ALAMEMQGLG KVGKEQEEVV 300 EPLDSGDKEL DEGFWEELLS ERFEGDSTIP SADVGEDEDV IILADYFGSW PK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MNYLYPVKEE YPGSSSSQPG PGFDQMVMTI PPQPMEGLND MGPPPFLNKT YDMVDDSGSN  60
GVVSWSRGGA SFVVWDPHTF VMSLLPKYFK HNNFSSFVRQ LNTYGFRKVD PNRWEFANEG  120
FVRGQKHLLK NIKRRKAPSQ PFPAQQAVGP CMELGHFGID GEVDRLRHDK QVLMMELVKL  180
RQQQQSTRAY LQAMEQRLQG TELKQQQMMS FLARAMQNPA FIQQLVQQKE KKKELEEAMT  240
KKRRRPIDQG LSGVGGGKSN QVKREPPEFG DCEYEMSELE ALAMEMQGLG KVGKEQEEVV  300
EPLDSGDKEL DEGFWEELLS ERFEGDSTIP SADVGEDEDV IILADYFGSW PK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	135	LKNIKRR
2	231	245	KKKELEEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-100	HSF family protein