PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019506.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 735aa    MW: 82593.8 Da    PI: 5.8349
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019506.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS385.37.1e-1183577281373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA+avss+d + a++lL+++++++s  gd+ qRla++f+++L+arla++++++y al++++ts    ++ l+a+++++ ++P+++++ + a
  PCP019506.1 357 LRTLLISCAQAVSSDDRRTANELLKQIRQHSSAFGDSSQRLAHCFANGLEARLAGTGTQIYTALSSKTTS---AADMLKAYQTYFGACPFMRVAIIFA 451
                  6789**************************************************************9999...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                   q+I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp  lRiTg++ p+sg   +e+++etg+rLak++e+ +vpfe+n  +ak++e++++ee
  PCP019506.1 452 DQMISKLAEKAETLHIIDFGILYGFQWPALIHCLSRRAGGPPkLLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYNG-IAKKWEAIQYEE 548
                  **************************************9988689**********9*****************************.7*********** PP

         GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                  L+vk++E+laVn+ ++ ++llde+v ++s+rd+vL+l++s++P++++++  + +++++ F++rf eal ++salfd+++++++re++ r + E+e+lg
  PCP019506.1 549 LKVKRDEVLAVNCLFRFKNLLDETVVVNSPRDAVLNLIRSMNPDIFIHSVVNGSYGAPFFVTRFREALFHFSALFDMFDTNISREDQMRLMFEEEFLG 646
                  ************************************************************************************************** PP

         GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  re+vn vaceg+er+ r et+++W+ r ++aGFk++pl+ + ++++++ +++ + + ++v+e+ +++++gWk+r ++s S+W
  PCP019506.1 647 REVVNTVACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKIRAKVKRGYHRDFMVDEDGNWMLQGWKGRIIYSSSCW 728
                  ******************************************************999************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MDPSSYQLPD SNSNFIDQTL SPNFNEYPSS DPFVDLSFLC QNPSNSALSP SLSPEGDDGD  60
YSDSVLRYIN QVLMEEDMET KPCMFHDPLA VQAAEKSLFE VLGGKFPPSP NQHPHNFESP  120
YGRSSATFSD HSGNNSSGLS SSTSYWDDSR SSVDVIEHKA SILQNPIPEN FVFQSKAKSQ  180
FSSNGNGLVG SYVTEPMVAN LFSENELVLQ FNRGVEEARK FLPRGQLIVD VENNKPYTVA  240
NGKAENVVVK TEKDEGEYFP TSSRGKKSHE REDADLEVGR STKQSAVYED TEADLSEIFD  300
KVLVCGGGKS KPIVSEGEEV CLDEANKALQ QNGQSVGTSN GKTRAKKKGD KKEVIDLRTL  360
LISCAQAVSS DDRRTANELL KQIRQHSSAF GDSSQRLAHC FANGLEARLA GTGTQIYTAL  420
SSKTTSAADM LKAYQTYFGA CPFMRVAIIF ADQMISKLAE KAETLHIIDF GILYGFQWPA  480
LIHCLSRRAG GPPKLLRITG IELPQSGFRP EERVQETGHR LAKYCERYNV PFEYNGIAKK  540
WEAIQYEELK VKRDEVLAVN CLFRFKNLLD ETVVVNSPRD AVLNLIRSMN PDIFIHSVVN  600
GSYGAPFFVT RFREALFHFS ALFDMFDTNI SREDQMRLMF EEEFLGREVV NTVACEGSER  660
VVRPETYKQW QVRNMRAGFK QLPLDRELMN KIRAKVKRGY HRDFMVDEDG NWMLQGWKGR  720
IIYSSSCWVP SRSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein