PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019505.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 811aa    MW: 90982.8 Da    PI: 5.1937
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019505.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.32.8e-1104358081373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL+ cA+avs++d++ +++lL++++++asp+gd  qRla++f+++L+ar+a++++++ k  ++  + +++ ++ l++++++  ++P  +++ l  
  PCP019505.1 435 LRNLLILCAQAVSTNDFRTTSELLKQVRQHASPNGDGSQRLAHFFANGLEARMAGTGTGTQKFYTSIVK-RSSAVDMLKSYQVYLSACPSKRMCMLFK 531
                  6899***************************************************99999876655554.47899*********************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N++Il+ +e+++++Hi+Df+i +G+QWp L+q L++R++gpp+lRiTg++ p++g   +e +eetg+rLa+++e+++vpfe+n+++++++e+++le+L
  PCP019505.1 532 NKMILKMAEKATTLHIVDFGILYGFQWPILIQHLSKRRGGPPKLRITGIEVPQPGfrPAEWIEETGRRLARYCERFNVPFEYNAIASQDWESIQLEDL 629
                  ******************************************************9*99**************************9999********** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +++++E+laVn++++ ++llde+v+++ +rd+vL+l+++++P+++v++  + ++n++ F++rf eal +ys+l+d+++ ++pr++eer   E e+ gr
  PCP019505.1 630 KTERNEVLAVNCMFRFKNLLDETVEVNCPRDAVLQLIRKMKPDIFVHSIINGSYNAPFFVTRFREALFHYSSLYDAFDINIPRDNEERLRFESEFYGR 727
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  e++nv+aceg er+er et+++W+ r ++aG++p++l+++ +k  k  ++  + + + ++++s+++++gWk+r +++ S+W
  PCP019505.1 728 EAMNVIACEGVERVERPETYKQWQVRCMRAGLQPLQLDQDLVKILKDKVKAWYHKDFVLDQDSDWMIQGWKGRIVYASSCW 808
                  *****************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 811 aa     Download sequence    
MDHPTFNGSP DYMNGFSIDD LAFSPNSTQF SNLTNEYQFN QFSPDLNFMD NHFSLPPDFE  60
QGNIVPEVSL TTSGESFVPS NSLSPPDGGS LSLPTAVSVG GVDSSSDDND FSEAVFKYVN  120
QILLEENIEK KPGMFFDPLG LRVTEKSFYD VLGQQYPFSP NQQPLHINPN VESPDGNNSG  180
SCGDCSGSNN SPSPGTSNSI DPQRVGDSGD QKSSFPQTTL PNDNPFQFTS HSSSQLSVPL  240
ENRMTSVGDG QHVGGGQRLD GMLQGSSVEE FVAQNIYTDS DSILQFQRGL EEASKFLPKS  300
TQLLVDLESN TVSPEVKASV PMVTVQKEKS ERKNSPNGSK GRKNREWEDV DLEEGRSSKQ  360
SAVYIEKTEE SELSEMFDKV LLSTGGNNES QCDNVAFKNE PSKTLQPSGQ PQGSNGNGRK  420
ARGKKQGKKK ETVDLRNLLI LCAQAVSTND FRTTSELLKQ VRQHASPNGD GSQRLAHFFA  480
NGLEARMAGT GTGTQKFYTS IVKRSSAVDM LKSYQVYLSA CPSKRMCMLF KNKMILKMAE  540
KATTLHIVDF GILYGFQWPI LIQHLSKRRG GPPKLRITGI EVPQPGFRPA EWIEETGRRL  600
ARYCERFNVP FEYNAIASQD WESIQLEDLK TERNEVLAVN CMFRFKNLLD ETVEVNCPRD  660
AVLQLIRKMK PDIFVHSIIN GSYNAPFFVT RFREALFHYS SLYDAFDINI PRDNEERLRF  720
ESEFYGREAM NVIACEGVER VERPETYKQW QVRCMRAGLQ PLQLDQDLVK ILKDKVKAWY  780
HKDFVLDQDS DWMIQGWKGR IVYASSCWVP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein