PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019489.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 327aa    MW: 34927.5 Da    PI: 5.6835
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019489.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.25.1e-30155208155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  PCP019489.1 155 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 208
                  59*******************.********************************8 PP
2Myb_DNA-binding48.32.3e-15157207148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
      PCP019489.1 157 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 207
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGEEVRMSEY EGGGSGGDDG DDEARVSEWE AGLPSADDLT PLSQPLIPIE LASAFSISPE  60
PSRTAVDVNR ASQKTVSTLR GGALSQGFSS NYKSFDENRS DDVEPMIVEV DESGERYGSD  120
SRKSRKVDCS TEEADSTLRT DNLSPDDTSA RTLKRPRLVW TPQLHKRFVD VVAHLGIKNA  180
VPKTIMQLMN VEGLTRENVA SHLQKYRLYL KRMQGLSGDV GPSSSDQLFA TTPVPQSLHH  240
ESGGGGGSGP AGSGQSHGHG NGQFSFPMPY PPPGMMQMPV LGLSQGHGHM GMPGGAGGHG  300
GGYHGFESHH YNMGSMVSYQ HAASNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-81G2-like family protein