PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019461.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 306aa    MW: 32946.6 Da    PI: 7.3968
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019461.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.6e-10653346
                     SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqk 46
                      W++eEd+ + +a++++  +     +W++Ia+ ++  ++ +++k ++ +
      PCP019461.1  6 VWSKEEDKAFENAIAMHWIDenseeQWEKIAELVP-SKSMEELKQHYEM 53
                     7*****************99***************.***********76 PP
2Myb_DNA-binding38.92e-12137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
      PCP019461.1 137 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 181
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSSSSVWSKE EDKAFENAIA MHWIDENSEE QWEKIAELVP SKSMEELKQH YEMLVDDVGA  60
IEAGRVSPPN YTADEAANTV SSSKDSGHRA SSSGASASDK RLNCGQGGGL LGSGHDSASH  120
GGKGGSRADQ ERKKGIPWTE EEHRLFLLGL DKFGKGDWRS ISRNFVISRT PTQVASHAQK  180
YFIRLNSMNR DRRRSSIHDI TSVNNGDVSS HQQPPITGQQ TSSYAPTAAT TIGVGVGPQS  240
VKHRPQPHMA GLGMYGAPMG HPVSAPPGHM ASAMGTPVML PPGHHPHAHP PYAVPVAYPM  300
AHPTMH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.16e-79MYB family protein