PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019320.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 483aa MW: 53428.2 Da PI: 6.5591

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019320.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	76.9	2.3e-24	165	221	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ ++v++i+Y+++H+h+ PCP019320.1 165 SDGYNWRKYGQKQVKSPQGSRSYYRCTYSECYAKK-IECCDHSGHVTDIVYKSQHTHD 221 7******************************98.*******************7 PP
2	WRKY	98.1	5.7e-31	346	402	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+ PCP019320.1 346 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTSAVIITYKGVHDHD 402 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAERHESSDA LPTEKLHPRK GEQEEGGDGD EDDDEERKQR LGEFQPGELK SSVSELRQTQ 60 LETLTAPSTQ EFSENDQFAG LQLESVSQSI DGAELQEQLG LSHQEILASV RNQDIQIQKQ 120 SQSQLTVYPT PFSELSPTSV TQSISSAPSP ILIEQRVPHG KTSASDGYNW RKYGQKQVKS 180 PQGSRSYYRC TYSECYAKKI ECCDHSGHVT DIVYKSQHTH DPPRKSICIK ENKLALSAEC 240 VRYSVVPAEH SCRTVNDSEV STSSKEPIQE TPSVPERKRQ STSDSDDNGD VKIKEENGDG 300 DEPEPKRRQV YLMKKGKSEY SASLSKPGKK PKFVVHAAGD VGISGDGYRW RKYGQKMVKG 360 NPHPRNYYRC TSAGCPVRKH IETAVDNTSA VIITYKGVHD HDMPVPKKRH GPPSAPLVAA 420 AAPASMNNLH IKKTDTDPNQ ISSTQWSVDT GGELTGEAFD LGGEKAMESA RTLLSIGFEI 480 KHC

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAERHESSDA LPTEKLHPRK GEQEEGGDGD EDDDEERKQR LGEFQPGELK SSVSELRQTQ  60
LETLTAPSTQ EFSENDQFAG LQLESVSQSI DGAELQEQLG LSHQEILASV RNQDIQIQKQ  120
SQSQLTVYPT PFSELSPTSV TQSISSAPSP ILIEQRVPHG KTSASDGYNW RKYGQKQVKS  180
PQGSRSYYRC TYSECYAKKI ECCDHSGHVT DIVYKSQHTH DPPRKSICIK ENKLALSAEC  240
VRYSVVPAEH SCRTVNDSEV STSSKEPIQE TPSVPERKRQ STSDSDDNGD VKIKEENGDG  300
DEPEPKRRQV YLMKKGKSEY SASLSKPGKK PKFVVHAAGD VGISGDGYRW RKYGQKMVKG  360
NPHPRNYYRC TSAGCPVRKH IETAVDNTSA VIITYKGVHD HDMPVPKKRH GPPSAPLVAA  420
AAPASMNNLH IKKTDTDPNQ ISSTQWSVDT GGELTGEAFD LGGEKAMESA RTLLSIGFEI  480
KHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-120	WRKY family protein