PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019104.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 331aa    MW: 37222.4 Da    PI: 4.8228
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019104.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.73.4e-17102187291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  +Y+eY+++ GF v k++s+k  ++ge    t++C ++g++++++++     ++ ++ + +Cka+l+  +   +kw+v++++l+HnH l+p
  PCP019104.1 102 YYKEYGRQSGFPVIKRSSTKG-DDGELRYITMCCARSGTSKSNSSN---PLKPYPSIKNDCKAQLRAGLYLGEKWRVNSVKLDHNHGLSP 187
                  8*************9999887.9999***************99988...999***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MFYVLGTGSS SNEFTEEDDV VEVSSCNETE SDGVHTIETS NESIEEDDVI EATFDATEAE  60
SNGVHAVENN GTNMENTMNV EEKVQEPHVG MIFDNADQVA TYYKEYGRQS GFPVIKRSST  120
KGDDGELRYI TMCCARSGTS KSNSSNPLKP YPSIKNDCKA QLRAGLYLGE KWRVNSVKLD  180
HNHGLSPTKT RYWKCFREVS SSVKKKLEVN DKAGIRVNKS YNSVVVEVGG HENMKCLEKD  240
CRNYIEKVRR LQLGEGDATA VQNYFVSMQA QNANFFYAID LDKNGRLRNV FWADARSRAL  300
YEEFGDVVTF DTTYLTNKPG LLVCLVMLQV E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-36FAR1 family protein