PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019049.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 369aa    MW: 40278.7 Da    PI: 8.1084
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019049.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.6e-1550100155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GV+ ++ r +Wv+eI+d    + k+ r++lg++  ae+Aa+a++aa+++l g
  PCP019049.1  50 PKYRGVWLRR-RTKWVSEICD----KrKKFRIWLGTYPKAEMAARAYDAAALALQG 100
                  79****8887.8*********....334689*********************9987 PP

2AP254.13.9e-17245292255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr +k +g+Wv+eI+       + k+ +lg++ tae+Aa+a++aa+++l+g
  PCP019049.1 245 KYRGVRLRK-SGKWVSEIYQ------KgKKLWLGSYPTAEMAARAYDAAALALKG 292
                  8*******9.7******999......44************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MTNSDSLADK DTQKWTSERG QEPNISEEQS RNKKKKRQRN NDHSYGGKHP KYRGVWLRRR  60
TKWVSEICDK RKKFRIWLGT YPKAEMAARA YDAAALALQG ASASLNFPGL ATSLPKPESL  120
SPSSIQAAAA KAAAAEAEAE AETAFGEKQI VWEAVTEEAK ASSIDQDPTS TIASTDCDAE  180
KLVSNAAESF KISTEHIPIN SEDCTSEKGK EPNNAEEQSI KKKKRQRTST CTSDDHHSEG  240
SNQQKYRGVR LRKSGKWVSE IYQKGKKLWL GSYPTAEMAA RAYDAAALAL KGASTNLNFP  300
ELAQPLPQSD SLPPTDMQAA ASASGEMQIV CEAVTEEADP RRKANLLMSP NSNNAQESTS  360
TCASTAEGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439KKKRQR
25873RRRTKWVSEICDKRKK
3222227KKKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-17ERF family protein