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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP019049.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 369aa MW: 40278.7 Da PI: 8.1084 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.6e-15 | 50 | 100 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV+ ++ r +Wv+eI+d + k+ r++lg++ ae+Aa+a++aa+++l g PCP019049.1 50 PKYRGVWLRR-RTKWVSEICD----KrKKFRIWLGTYPKAEMAARAYDAAALALQG 100 79****8887.8*********....334689*********************9987 PP | |||||||
2 | AP2 | 54.1 | 3.9e-17 | 245 | 292 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eI+ + k+ +lg++ tae+Aa+a++aa+++l+g PCP019049.1 245 KYRGVRLRK-SGKWVSEIYQ------KgKKLWLGSYPTAEMAARAYDAAALALKG 292 8*******9.7******999......44************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MTNSDSLADK DTQKWTSERG QEPNISEEQS RNKKKKRQRN NDHSYGGKHP KYRGVWLRRR 60 TKWVSEICDK RKKFRIWLGT YPKAEMAARA YDAAALALQG ASASLNFPGL ATSLPKPESL 120 SPSSIQAAAA KAAAAEAEAE AETAFGEKQI VWEAVTEEAK ASSIDQDPTS TIASTDCDAE 180 KLVSNAAESF KISTEHIPIN SEDCTSEKGK EPNNAEEQSI KKKKRQRTST CTSDDHHSEG 240 SNQQKYRGVR LRKSGKWVSE IYQKGKKLWL GSYPTAEMAA RAYDAAALAL KGASTNLNFP 300 ELAQPLPQSD SLPPTDMQAA ASASGEMQIV CEAVTEEADP RRKANLLMSP NSNNAQESTS 360 TCASTAEGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 39 | KKKRQR |
2 | 58 | 73 | RRRTKWVSEICDKRKK |
3 | 222 | 227 | KKKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32800.1 | 2e-17 | ERF family protein |