PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018822.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 382aa MW: 43027.2 Da PI: 8.5676

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018822.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.8e-32	246	301	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+ ++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ PCP018822.1 246 KQRRCWSPELHRRFVNTLQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 301 79****************************************************97 PP
2	Myb_DNA-binding	41.2	3.9e-13	248	299	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+ +qlGg t+k I + m+ g+t ++ks++qky+ PCP018822.1 248 RRCWSPELHRRFVNTLQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 299 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MFVPKTISDF LKEVSMIGNV SERLSKLDDF VNRLEDEMRK IDAFKRELPL CMLLLNDVIR 60 ALKEEAMQCT APDIQPVLEE FIPLKNDCDK NKGGSSNNNK KEKDYRDKKN WMSSVQLWNT 120 DNYQQHPSSD FPYDRKRVSE IDSKRNEAEN GVANEDPFQT CGNRTGGKAF MPFKGYPAFS 180 VTPVRLEEKE ELPVRGLSLL TPGIKNPREE STSSGSRSTC GRSTSFPTAK AQSNMRTLPQ 240 QPTSRKQRRC WSPELHRRFV NTLQQLGGSQ VATPKQIREL MQVDGLTNDE VKSHLQKYRL 300 HTRRVPGATT AAPKNQAVVL GGLWTSHDQY TDSSKASSSQ SGSPQGPLQL TGTGRDDEDD 360 EDAKSESHSW KGHIHKPGKD DV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MFVPKTISDF LKEVSMIGNV SERLSKLDDF VNRLEDEMRK IDAFKRELPL CMLLLNDVIR  60
ALKEEAMQCT APDIQPVLEE FIPLKNDCDK NKGGSSNNNK KEKDYRDKKN WMSSVQLWNT  120
DNYQQHPSSD FPYDRKRVSE IDSKRNEAEN GVANEDPFQT CGNRTGGKAF MPFKGYPAFS  180
VTPVRLEEKE ELPVRGLSLL TPGIKNPREE STSSGSRSTC GRSTSFPTAK AQSNMRTLPQ  240
QPTSRKQRRC WSPELHRRFV NTLQQLGGSQ VATPKQIREL MQVDGLTNDE VKSHLQKYRL  300
HTRRVPGATT AAPKNQAVVL GGLWTSHDQY TDSSKASSSQ SGSPQGPLQL TGTGRDDEDD  360
EDAKSESHSW KGHIHKPGKD DV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	1e-55	G2-like family protein