PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018493.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 331aa    MW: 36789.9 Da    PI: 4.8457
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018493.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.42.9e-23157217259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYG K+++++++pr+Y+rCt++   gC+++k+v++ ++ p+v+ +tY g+H+++
  PCP018493.1 157 EDGHAWRKYGNKVIHNAKHPRNYFRCTHKfeqGCKATKHVQQVQDHPSVLRTTYYGTHTCR 217
                  8***************************9999**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEWSWSDSVL SNRERVMEEL IQGRELASQL STAYDNRSVV NGDDEGSAEG FVNTLLILNG  60
KESDQEFVSD QIQGNSSSVS GGGGSGVNDG GSVVSGGGAD LSSWDANHDH AAAIKSEDYT  120
EEEISCKSTS SFKDGRDSYK RRKTTDSWTR DTPGLIEDGH AWRKYGNKVI HNAKHPRNYF  180
RCTHKFEQGC KATKHVQQVQ DHPSVLRTTY YGTHTCRDYF KTSDLVLDCT NHRDSSMFIS  240
FDNDNCLTNK QEHPFFASFS SSSVKEELIV KATSDHTLTS HDNHWLPSDY LVSPDDLMAF  300
KSSGPVSGFS SSIDQYDGDD DVFSRIIAEL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-26WRKY family protein