PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018491.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 349aa    MW: 38177.7 Da    PI: 5.3571
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018491.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.81.6e-21162222259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK ++++++pr+Y+rCt++    C+++k+v++ ++ p v+ ++Y g+H+++
  PCP018491.1 162 ADGHAWRKYGQKIIHNAKHPRNYFRCTYKydqACKATKHVQQVQDHPPVFRTVYYGTHKCR 222
                  7***************************99999*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MEEFIQGREL ASQLSKAFDN RSLVNGEDWG SAEGIVNKIL GSFVGTLLII NGKESVQEFV  60
SDQIQGNSSD VSGGGSGGGS GVGGGGSGVG SGVGDGGSDG GGGAYSSSAD ANHDHAAAMK  120
SEDCTEEEIS CKSTLTFKDG RGSYKRRKTS HSWTRDTPAL IADGHAWRKY GQKIIHNAKH  180
PRNYFRCTYK YDQACKATKH VQQVQDHPPV FRTVYYGTHK CRYYLKTSEL LLDCTSPRDS  240
SQFISFENVN CLTNKQEHPF FASFTSSSVE EEVFVREDMP TTDHMVTSDH NHSSPCDHLV  300
SRDLTAFESS GPMSGFSSSI DQYDHEDVFS GMIAESYFDI YNEVLQYGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-24WRKY family protein