PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018490.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 333aa    MW: 37567.1 Da    PI: 6.1089
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018490.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.61.1e-22162222259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  dD ++WrKYGqK+++++++pr+Y+rCt++    C+++k+v++ ++ p v+ +tY g+H+++
  PCP018490.1 162 DDSHAWRKYGQKVIHNAKHPRNYFRCTHKydqACKATKQVQQVQDHPPVFRTTYYGTHTCR 222
                  8***************************99999*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MEWSWPESVL SNRERVVEEL IQGRELASQL SKAFANRSHV VNGDDGGSAE GIVNKILGSF  60
VNTLLIINGM ESDQEFVSDQ IQGNSSGVSG GSTGVSDGRR GGAYSSSWDA NHDHPANIKS  120
EDYNEEEISC KSTSTFKDRR GSYMRRKASH SWTRDTPDSN IDDSHAWRKY GQKVIHNAKH  180
PRNYFRCTHK YDQACKATKQ VQQVQDHPPV FRTTYYGTHT CRDYPKASEL VLDCTSPRDS  240
SKFISFDNAN CLENKQEHPF FTSFASSSVK EELIVKATSD HTVTSHNNHS SPSDYLLSHD  300
DLMAFDSFWP MSEFSSSIDQ YDRDVFLKMI AES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-33WRKY family protein