PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018489.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 328aa    MW: 36999.6 Da    PI: 6.19
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018489.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.42.5e-22152212259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+++++++pr+Y+rCt +    C+++k+v++ ++ p v+ +tY g+H ++
  PCP018489.1 152 ADGHAWRKYGQKNIHNAKHPRNYFRCTNKydqACKATKHVQQVQDHPPVFRTTYYGTHSCR 212
                  7**************************998889*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEWSWPDSVL SNRERMVEEL IQGRELASQL SRGFDNRPIL VNGVDGGSDE GTVNKILGSF  60
VNALLILNGK ESDQEFISDQ IQGNSNDVSG GGGADSSSWD GNHDHAAAIK SEDYTEEEIS  120
CKSTSTFKDR RGSYKRRKTS HSWTRDIPAL IADGHAWRKY GQKNIHNAKH PRNYFRCTNK  180
YDQACKATKH VQQVQDHPPV FRTTYYGTHS CRDYLKTSEL VLDCTNPRDS SKFISFDNAN  240
CFTNKQEHPF PASFTSSSVK KELIVKATSD HTVTSHHNHS LPSDYLVLHD DLMEFASSEP  300
VGGFSSSIDQ YDHDDVFLRM IAESYFDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-27WRKY family protein