PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018460.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 729aa MW: 83141.3 Da PI: 6.8397

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018460.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.2	2.2e-31	82	169	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s ++s+r+g+i++r+ vCs+eg+r++ ++ +++r+r++tr+gCka+++vkk+++g+w v+kl++eHnHel+p PCP018460.1 82 FYNSYARRVGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRNGGEN--RSKRQRTVTRVGCKAQMTVKKQTSGRWAVSKLVKEHNHELVP 169 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MDSEPLNIDS DNKVAEFGEE DDAATALHLQ HTDHSYDIFD DHLVQPSNSP RSRDDFPNGD 60 GDPSLEPYEG MEFDSEQASR IFYNSYARRV GFSTRVSVYQ RSRRDGSIIC RQIVCSREGF 120 RRNGGENRSK RQRTVTRVGC KAQMTVKKQT SGRWAVSKLV KEHNHELVPP DRVHCLRSHR 180 HVSGPARSLI DTLQAAGMGP SGVMSVLIKE SGGINNVGFT KVDCQNYMSS SRQRTLGSGG 240 QVVFDYLKRM QVEDPDFFCA VQGDFENSTG NIFWADANSR MNYDYFGDTV TFDTTYRTNR 300 YRVPFAPFTG WNHHGQPVLF GCALLLNESE SSFVWLFQTW LAAMSSRYPV SLTTDQDRII 360 RAAVVHVFPR TRHRFCKWNV FREAQEKLSD IYHSHPTFEA ELLKCINVTE TIEEFESCWE 420 SLVQRYDLGD NEWLQSIYNA RQQWVPVFLQ DTFFGEMSAT QGSDNINSYF DGYINASTSI 480 QVLIKQYEKA IATRHEREVK ADYDTMNSSP ILRTPSPMEK QAAKLYTRII FMKFQEELVE 540 TLAYPATVVD DTGSETMYRV AKFGEDHKMH SVKFNVFEKK ARCSCQLFEF SGIICRHILA 600 VFRVTNVLTL PSHYILKRWT KNAKSGVVWD ENTLGLPNDS QDSTAARYDN LRREAIKYVE 660 EGAESVHVYN VAMDALHEAA NEVAAAKKHG LAIAQNTPVN CSQKLQSCTM VFSRKLSKAK 720 SEMISEISF

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MDSEPLNIDS DNKVAEFGEE DDAATALHLQ HTDHSYDIFD DHLVQPSNSP RSRDDFPNGD  60
GDPSLEPYEG MEFDSEQASR IFYNSYARRV GFSTRVSVYQ RSRRDGSIIC RQIVCSREGF  120
RRNGGENRSK RQRTVTRVGC KAQMTVKKQT SGRWAVSKLV KEHNHELVPP DRVHCLRSHR  180
HVSGPARSLI DTLQAAGMGP SGVMSVLIKE SGGINNVGFT KVDCQNYMSS SRQRTLGSGG  240
QVVFDYLKRM QVEDPDFFCA VQGDFENSTG NIFWADANSR MNYDYFGDTV TFDTTYRTNR  300
YRVPFAPFTG WNHHGQPVLF GCALLLNESE SSFVWLFQTW LAAMSSRYPV SLTTDQDRII  360
RAAVVHVFPR TRHRFCKWNV FREAQEKLSD IYHSHPTFEA ELLKCINVTE TIEEFESCWE  420
SLVQRYDLGD NEWLQSIYNA RQQWVPVFLQ DTFFGEMSAT QGSDNINSYF DGYINASTSI  480
QVLIKQYEKA IATRHEREVK ADYDTMNSSP ILRTPSPMEK QAAKLYTRII FMKFQEELVE  540
TLAYPATVVD DTGSETMYRV AKFGEDHKMH SVKFNVFEKK ARCSCQLFEF SGIICRHILA  600
VFRVTNVLTL PSHYILKRWT KNAKSGVVWD ENTLGLPNDS QDSTAARYDN LRREAIKYVE  660
EGAESVHVYN VAMDALHEAA NEVAAAKKHG LAIAQNTPVN CSQKLQSCTM VFSRKLSKAK  720
SEMISEISF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein