PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018281.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 603aa MW: 67290.5 Da PI: 4.887

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018281.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.2e-09	415	447	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+ +e+ LA+++gLt +qV +WF N R + PCP018281.1 415 LPYPKDSEKIMLARQTGLTRNQVANWFINARVR 447 79*****************************88 PP
2	BELL	119.8	1.2e-38	273	344	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+kk+kLl++l+eVd+rYkqy++q+q+v+s F+ vag g+a pYt+lAl+aiSrhFr+L+dai++qi PCP018281.1 273 ERQDLQNKKTKLLTMLDEVDRRYKQYYHQMQAVVSFFDKVAGNGAAGPYTALALQAISRHFRSLRDAIKGQI 344 799*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MATYFQNLSN QNLLNPYQGD EKLPSYPEPP GNMMMYLNQT SYAAGSYSEV LSGGNFSPQK 60 YADSDGGRSE MMFIPPTSDP VRDCNVGGES LIGKHSMQDH GLSLSLSTQI PQPVSLPSFQ 120 YQYPNSSLSS VLSNAPMIGK GEEYNQSEEF RNFESLASGL YGGGHEAVKT QAFYNPMCSS 180 GSKEMHSEYV YDSLGSTNAM LSSKYLKAAQ QLLDEVVNVK KALKQSRLDK NQSFKRSGSD 240 GSKETDGNDQ HLPRSSDPGE SSTISSVELS AAERQDLQNK KTKLLTMLDE VDRRYKQYYH 300 QMQAVVSFFD KVAGNGAAGP YTALALQAIS RHFRSLRDAI KGQIQVTRKR LGEQDNSSDG 360 QGSVIPRLRY VDQQLRQQRA FQQLGGLQHA WRPQRGLPES SVSILRAWLF EHFLLPYPKD 420 SEKIMLARQT GLTRNQVANW FINARVRLWK PMIEEMYKEE FGDLDTDAKS SPENALKEAA 480 RVDLSASEDR KEELHESLIS TTADSIEPGQ MHDSKSGHSS TYDMPGLDHF AVGNDVSLAL 540 ELRHCEEHDG FPPSTGSHVT VSDAAASLDC HYEDPEQQHL IQRLVEEEEE EEEEEEALGI 600 FVN

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MATYFQNLSN QNLLNPYQGD EKLPSYPEPP GNMMMYLNQT SYAAGSYSEV LSGGNFSPQK  60
YADSDGGRSE MMFIPPTSDP VRDCNVGGES LIGKHSMQDH GLSLSLSTQI PQPVSLPSFQ  120
YQYPNSSLSS VLSNAPMIGK GEEYNQSEEF RNFESLASGL YGGGHEAVKT QAFYNPMCSS  180
GSKEMHSEYV YDSLGSTNAM LSSKYLKAAQ QLLDEVVNVK KALKQSRLDK NQSFKRSGSD  240
GSKETDGNDQ HLPRSSDPGE SSTISSVELS AAERQDLQNK KTKLLTMLDE VDRRYKQYYH  300
QMQAVVSFFD KVAGNGAAGP YTALALQAIS RHFRSLRDAI KGQIQVTRKR LGEQDNSSDG  360
QGSVIPRLRY VDQQLRQQRA FQQLGGLQHA WRPQRGLPES SVSILRAWLF EHFLLPYPKD  420
SEKIMLARQT GLTRNQVANW FINARVRLWK PMIEEMYKEE FGDLDTDAKS SPENALKEAA  480
RVDLSASEDR KEELHESLIS TTADSIEPGQ MHDSKSGHSS TYDMPGLDHF AVGNDVSLAL  540
ELRHCEEHDG FPPSTGSHVT VSDAAASLDC HYEDPEQQHL IQRLVEEEEE EEEEEEALGI  600
FVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75410.2	1e-112	TALE family protein