PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018253.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 250aa    MW: 27196 Da    PI: 6.4146
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018253.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000127496123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C + F++   L  H+++H
  PCP018253.1 74 YTCTFCRREFRSAQALGGHMNVH 96
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MAELGLLSRT DLQNLALSQQ NQNQTRLSNP NLVPEAWMWN PKAAQEPEDD SWEVRAFAED  60
TGNVMGTTWP PRSYTCTFCR REFRSAQALG GHMNVHRRDR ARLHQSHPQM SPAAVSSAST  120
SSFIIPTQEF VNANGGLCLV YQLPSPDSIN GASFNTATSL MSSSRTHGHG VESSSPSTLL  180
SISPNIPPPD YLVSVVPPAG RSNSNSQYCH SNKSSAHDDP EPSKSGTEKG NFEELDLELR  240
LGHGRPAVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.11e-35C2H2 family protein