PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018244.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 576aa MW: 63718.6 Da PI: 8.4904

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018244.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71.4	1.1e-22	279	323	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rC+RtDGKkWRCsr+v ++k+CErH h+ r+rsrk++++ PCP018244.1 279 DPEPWRCKRTDGKKWRCSRDVAFDQKYCERHAHKTRNRSRKPVDS 323 79***************************************9985 PP
2	QLQ	30.9	8.2e-12	227	261	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ ++L++Q ++yKy+ ++ P Pp+Ll++i+k PCP018244.1 227 PFTSAQMEELERQTMIYKYMDSS-PAPPQLLLPISK 261 9****************9765.88*****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MKGPQRRRVL RGGRRWRVAD ESQVVVLEDG FWRFVTTKKK EFEALRSQMP LALGDCVDLA 60 KFVMEAISEV FLVDNRVERS DMGCAKERGC RGKNGRERNG FAEKGAAAET EWLGLMMQKS 120 QQTQQTQQSF PRKKTMMVMH HHHHHHDPLL ASAGREACGV WDNSPASGGG LLFCNTSNPV 180 SSCPTDLYPV GSDFVLPKSL QHHLPCSDHS LAFSSTGGMV NANVRVPFTS AQMEELERQT 240 MIYKYMDSSP APPQLLLPIS KFPNLVKGSL ELGISGSSDP EPWRCKRTDG KKWRCSRDVA 300 FDQKYCERHA HKTRNRSRKP VDSQTLNPNL LSTNNNNMRS PRSNFFRQNH ISSQTTPFSC 360 NVVPSTAAGG SHVQPRSSAW FMNGEAPAVG GSNQEWEQMM PSMMGLKRSS SSCPYTKPTN 420 TDVDIPKQQT ESLLNLHTDC TGEIQGQQTQ QTRHFIDAWS KSASAEREED RVFVSSNQKL 480 PLSSLTLSMC GGKGSNEERE STQMGLGVLG AERESVGDLK SQWTNPMSWM MGSPPGGPLA 540 EALCLGIAGG SNGSDSGSTS YRSSRGDGRQ EYDLIN

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MKGPQRRRVL RGGRRWRVAD ESQVVVLEDG FWRFVTTKKK EFEALRSQMP LALGDCVDLA  60
KFVMEAISEV FLVDNRVERS DMGCAKERGC RGKNGRERNG FAEKGAAAET EWLGLMMQKS  120
QQTQQTQQSF PRKKTMMVMH HHHHHHDPLL ASAGREACGV WDNSPASGGG LLFCNTSNPV  180
SSCPTDLYPV GSDFVLPKSL QHHLPCSDHS LAFSSTGGMV NANVRVPFTS AQMEELERQT  240
MIYKYMDSSP APPQLLLPIS KFPNLVKGSL ELGISGSSDP EPWRCKRTDG KKWRCSRDVA  300
FDQKYCERHA HKTRNRSRKP VDSQTLNPNL LSTNNNNMRS PRSNFFRQNH ISSQTTPFSC  360
NVVPSTAAGG SHVQPRSSAW FMNGEAPAVG GSNQEWEQMM PSMMGLKRSS SSCPYTKPTN  420
TDVDIPKQQT ESLLNLHTDC TGEIQGQQTQ QTRHFIDAWS KSASAEREED RVFVSSNQKL  480
PLSSLTLSMC GGKGSNEERE STQMGLGVLG AERESVGDLK SQWTNPMSWM MGSPPGGPLA  540
EALCLGIAGG SNGSDSGSTS YRSSRGDGRQ EYDLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	9e-35	GRF family protein