PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018207.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 395aa MW: 44628.7 Da PI: 9.5079

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018207.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.2	3.7e-10	245	282	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gL+ +qV++WF N R + PCP018207.1 245 FEHflHPYPSDSEKLMLAQQTGLSRTQVSNWFINSRVR 282 664459******************************88 PP
2	BELL	92.7	3.6e-30	110	180	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r ++q+k ++L ++leeV+krYk y++q++ v++sFe++ glg+a+pY+slA k+i +hF cLk+ai +++ PCP018207.1 110 RVDVQMKNSRLTTMLEEVYKRYKLYCQQMESVVASFETIDGLGNAAPYISLAIKTILKHFGCLKNAILDKL 180 5689***************************************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MADDGLEAFH VPQQSRRDKL RFTLQNHPPQ PPFSLPLFSE SRHYDGVSFR AGELRSSVPL 60 GPFTGYASIL KRSRFLKPAQ QLLEDFCGSV LPDSDPPPPN CWSFCAKDHR VDVQMKNSRL 120 TTMLEEVYKR YKLYCQQMES VVASFETIDG LGNAAPYISL AIKTILKHFG CLKNAILDKL 180 QSGGKTSLGD EETDGFSVIG LQNNQNPNDH LNLKLTTTNN LRQSVSRSQR GLPENAVAVL 240 RTWLFEHFLH PYPSDSEKLM LAQQTGLSRT QVSNWFINSR VRIWKPMVEE IHILETQQAQ 300 TIPDPMNKSV KAPLHPSAEN PVLHLGTPPM NSSSQKAQDI QTKRPRKIQH DLPKQSETWR 360 RNAANGSLTS NDLQRIRKTT EIDEVSLALS LQARK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MADDGLEAFH VPQQSRRDKL RFTLQNHPPQ PPFSLPLFSE SRHYDGVSFR AGELRSSVPL  60
GPFTGYASIL KRSRFLKPAQ QLLEDFCGSV LPDSDPPPPN CWSFCAKDHR VDVQMKNSRL  120
TTMLEEVYKR YKLYCQQMES VVASFETIDG LGNAAPYISL AIKTILKHFG CLKNAILDKL  180
QSGGKTSLGD EETDGFSVIG LQNNQNPNDH LNLKLTTTNN LRQSVSRSQR GLPENAVAVL  240
RTWLFEHFLH PYPSDSEKLM LAQQTGLSRT QVSNWFINSR VRIWKPMVEE IHILETQQAQ  300
TIPDPMNKSV KAPLHPSAEN PVLHLGTPPM NSSSQKAQDI QTKRPRKIQH DLPKQSETWR  360
RNAANGSLTS NDLQRIRKTT EIDEVSLALS LQARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-74	TALE family protein