PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018198.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 467aa    MW: 51039.5 Da    PI: 7.0301
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018198.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-17160209155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PCP018198.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209
                  78*******************......55************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MLDLNLNVVV SGPNDVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARNDAVTTFN  60
FGILKVQGGD EEENDDVVVT KELFPVTGGL NNWSGQAHGH GQSSSSSLLV RKNLMELGFD  120
LGGSGEVRLV QQKQQQQPAA PPPQQQQAKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD  180
CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINYNLSD YEDDMKQMKN LTKEEFVHIL  240
RRQSTGFSRG SSRYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA ITNFEPSTYE  300
GEMMSEADGN HNLDLNLGIS PPSFGTGQGE GEGRLQFHSN PFDVHNGKRM EHNVNVTMSD  360
PPFRGLVMTS DHPPPLWNGV YPSYFPNQEG ATEKRLALGS QGPPNWAWQM HGQVTPMPLF  420
STAASSGFSF SANAPAAAVH PLQPSNPTAL NLCFALPATA ATHTSQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.11e-105AP2 family protein