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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP018198.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 467aa MW: 51039.5 Da PI: 7.0301 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.8e-17 | 160 | 209 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PCP018198.1 160 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 209 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MLDLNLNVVV SGPNDVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARNDAVTTFN 60 FGILKVQGGD EEENDDVVVT KELFPVTGGL NNWSGQAHGH GQSSSSSLLV RKNLMELGFD 120 LGGSGEVRLV QQKQQQQPAA PPPQQQQAKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD 180 CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINYNLSD YEDDMKQMKN LTKEEFVHIL 240 RRQSTGFSRG SSRYRGVTLH KCGRWEARMG QFLGKKAYDK AAIKCNGREA ITNFEPSTYE 300 GEMMSEADGN HNLDLNLGIS PPSFGTGQGE GEGRLQFHSN PFDVHNGKRM EHNVNVTMSD 360 PPFRGLVMTS DHPPPLWNGV YPSYFPNQEG ATEKRLALGS QGPPNWAWQM HGQVTPMPLF 420 STAASSGFSF SANAPAAAVH PLQPSNPTAL NLCFALPATA ATHTSQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-105 | AP2 family protein |