PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018175.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1029aa MW: 116051 Da PI: 6.2769

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018175.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.5	2.5e-14	90	151	2	67
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 fY++YAk+vGF + k +s++s+ +ge+++++f C ++g++++++++ ++r++ ++gCka++ PCP018175.1 90 FYKAYAKSVGFGTAKLSSRRSRVSGEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKACMS 151 **************************************999877....9***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1029 aa Download sequence
MGTLSSQILN LCPWEKPLSF HVCGTHETFT PLPFPTTFDA GCGVDLNFLN TTAPTTFMDS 60 SGPALALAPP SIAEPHDAME FESHEAAYTF YKAYAKSVGF GTAKLSSRRS RVSGEFIDAK 120 FSCIRYGNKQ QSDDAINPRP SPKIGCKACM SSAGQVHDNG RSLALEAGDS QLLLEYFMRM 180 QEDNPKFFYA VDLNEEHGLR NVFWVDAKGM EDYTNFNDVV FFDTTYFTYK YKIPLILFIG 240 VNHHIQPTLH GCALIADETV HTFMWLMQTW LIAMGEQAPR VILTDQNDAV KAAIPTVFPG 300 TRHCFSLWNI MEKMHRQLEF LSMWHDSFME KFNRTRWAPT FMRDISFAGL SPTSRSESLN 360 SSFNKYIQGE TSLREFMERY RAILEDRYEE ELKANFDGWH ETPELKSPFP FVKQMSLVYT 420 HKVFKYFQVE VLGAAACHLK KENEGETSTT YSVKDFEDNQ NYTVEWNESK SDIYCSCHLF 480 EYKGYLCRHA IVVLQMSGVF IIPPKCILQR WTNAAMSRHA IEGSLSQEGY DVALSAIKEA 540 WKQCASLNNS IENNAKPHDS AMHGVCGVDE ENQCSTTSSA NKTPRRAGFR KEVARNGNNT 600 SKKGKLEATT VGTQDGLHQM VDGVELNHMN AMGETSDQYA CTDELLKDGL AAVKVKVHQE 660 GGGGGEMDPS TKSLVSESEA APVRRYRIGY AFAPKKEQTF IQPSLLHHAS RYGIDFVPIS 720 IPDSTTTAKT LIEQGPFDCI IHKIYGPHWN QHLKEYSSRY PQTLILDPPE SIERLHNRVS 780 MLDVFAAFEL KPRQSGDKFQ SKISVPKQVP VDHYPEGEEE TKLLAGLEFP VIAKPLLANG 840 STKSHEMCLI FSPKGLRSLL ADTNSPILLQ QFANHGGVVF KGYAIGEHVQ CVKRRSLPDI 900 SKERVTALEE AVLPFSQISN SANDEHNLAH DPHEMPPLEF VEEAAKRIRV GLKLNFFNFD 960 MIRDSKDPNS YFVIDINYFP GYAKLPNYEH AFTDFLLNLL STSSHPQKQK ELLQLKEEEG 1020 ATSFESDVK

Sequence ? help Back to Top

Protein Sequence Length: 1029 aa Download sequence

MGTLSSQILN LCPWEKPLSF HVCGTHETFT PLPFPTTFDA GCGVDLNFLN TTAPTTFMDS  60
SGPALALAPP SIAEPHDAME FESHEAAYTF YKAYAKSVGF GTAKLSSRRS RVSGEFIDAK  120
FSCIRYGNKQ QSDDAINPRP SPKIGCKACM SSAGQVHDNG RSLALEAGDS QLLLEYFMRM  180
QEDNPKFFYA VDLNEEHGLR NVFWVDAKGM EDYTNFNDVV FFDTTYFTYK YKIPLILFIG  240
VNHHIQPTLH GCALIADETV HTFMWLMQTW LIAMGEQAPR VILTDQNDAV KAAIPTVFPG  300
TRHCFSLWNI MEKMHRQLEF LSMWHDSFME KFNRTRWAPT FMRDISFAGL SPTSRSESLN  360
SSFNKYIQGE TSLREFMERY RAILEDRYEE ELKANFDGWH ETPELKSPFP FVKQMSLVYT  420
HKVFKYFQVE VLGAAACHLK KENEGETSTT YSVKDFEDNQ NYTVEWNESK SDIYCSCHLF  480
EYKGYLCRHA IVVLQMSGVF IIPPKCILQR WTNAAMSRHA IEGSLSQEGY DVALSAIKEA  540
WKQCASLNNS IENNAKPHDS AMHGVCGVDE ENQCSTTSSA NKTPRRAGFR KEVARNGNNT  600
SKKGKLEATT VGTQDGLHQM VDGVELNHMN AMGETSDQYA CTDELLKDGL AAVKVKVHQE  660
GGGGGEMDPS TKSLVSESEA APVRRYRIGY AFAPKKEQTF IQPSLLHHAS RYGIDFVPIS  720
IPDSTTTAKT LIEQGPFDCI IHKIYGPHWN QHLKEYSSRY PQTLILDPPE SIERLHNRVS  780
MLDVFAAFEL KPRQSGDKFQ SKISVPKQVP VDHYPEGEEE TKLLAGLEFP VIAKPLLANG  840
STKSHEMCLI FSPKGLRSLL ADTNSPILLQ QFANHGGVVF KGYAIGEHVQ CVKRRSLPDI  900
SKERVTALEE AVLPFSQISN SANDEHNLAH DPHEMPPLEF VEEAAKRIRV GLKLNFFNFD  960
MIRDSKDPNS YFVIDINYFP GYAKLPNYEH AFTDFLLNLL STSSHPQKQK ELLQLKEEEG  1020
ATSFESDVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	0.0	FAR1 family protein