PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018084.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 443aa MW: 48463.1 Da PI: 7.8909

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018084.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107	2.9e-33	31	188	7	134
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssa.sec...eaes 77 rhsk+ T++g+RdRRvRls+++a++f+dLqd+L +d++sk+ieWL+++a ai el+++ +++sa + ++ PCP018084.1 31 RHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLNYDQPSKAIEWLIKAAADAIAELPSLnnssfpdtpkqlsdekrascergGFDSAeI-EfdqNYNQ 127 9**********************************************************999999888888887777777774444421.23345666 PP TCP 78 ssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 ++++++n+s++ + +++a+s+ s++s+ s l+l++ r+kar+rarer ++++ +++ PCP018084.1 128 NQNQTGNQSQHLSLSKSACSSTSETSKGSGLSLSRsevrVNRSKARERARERAAKDKDKES 188 6666667777777777778888888888888888753335569999999998887776664 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MRRSESFGCQ NLKLLMNLQT ESHCSISAVY RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ 60 DRLNYDQPSK AIEWLIKAAA DAIAELPSLN NSSFPDTPKQ LSDEKRASCE RGGFDSAEIE 120 FDQNYNQNQN QTGNQSQHLS LSKSACSSTS ETSKGSGLSL SRSEVRVNRS KARERARERA 180 AKDKDKESKE SIESACQHNI NNNISQQNAS FTELLTAGIG TAHNNNDSPT ASAHHHQQNH 240 GGGGGEPILF HKAPAPMDYF SPGLLGLSSS ARNHHSAGFS RQIHLGMNSI PQTMSLVSPF 300 NVSGEHHHGH HSSELQHFSF VPDLIPVTTS TEPGNGGDYD LNFSISSSGG LAGFNRGTLQ 360 SNSSSSPSLM PHHLQRFSPI DGSTNVPFFI GAAAAAAAPT MENHHHHHHQ QHHQQFPGGF 420 DRGLQQLYGD GTRHSDHKGK AKN

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MRRSESFGCQ NLKLLMNLQT ESHCSISAVY RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ  60
DRLNYDQPSK AIEWLIKAAA DAIAELPSLN NSSFPDTPKQ LSDEKRASCE RGGFDSAEIE  120
FDQNYNQNQN QTGNQSQHLS LSKSACSSTS ETSKGSGLSL SRSEVRVNRS KARERARERA  180
AKDKDKESKE SIESACQHNI NNNISQQNAS FTELLTAGIG TAHNNNDSPT ASAHHHQQNH  240
GGGGGEPILF HKAPAPMDYF SPGLLGLSSS ARNHHSAGFS RQIHLGMNSI PQTMSLVSPF  300
NVSGEHHHGH HSSELQHFSF VPDLIPVTTS TEPGNGGDYD LNFSISSSGG LAGFNRGTLQ  360
SNSSSSPSLM PHHLQRFSPI DGSTNVPFFI GAAAAAAAPT MENHHHHHHQ QHHQQFPGGF  420
DRGLQQLYGD GTRHSDHKGK AKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-30	TCP family protein