PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018011.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 682aa MW: 75919.3 Da PI: 7.7514

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	78	132	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt +LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl PCP018011.1 78 KPRLKWTLDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 132 79****************************************************8 PP
2	Myb_DNA-binding	62.4	9.3e-20	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT +++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ PCP018011.1 80 RLKWTLDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 131 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MMYHHQLQHH RQNHRQHQHQ HQHQHQHQHQ GKNIIHSSAS SSRISMPNIP SERILFLQQG 60 DQNSPAGDSG LVLSTDAKPR LKWTLDLHER FIEAVNQLGG ADKATPKTVM KLMGIPGLTL 120 YHLKSHLQKY RLSKNLHGGH VTSGPTKIGT GTVPVPVAGE SLISEANGSQ MSTMSIGIAP 180 QSNKGLHLNE TLEMQIEVQR RLHEQLEVQR HLQLRIEAQG KYLQSVLEKA QETLGRQNLG 240 TVGLEAAKVQ LSELVSKVSL NSAFTELKEL QGLCPQKTQT NQQPTDCSID SCLTSCEVSR 300 RDQDQIHSSG MPLRPNYNGR AAALLEHKEA AQDQRPILQN TQLNWCDDNM FRSPISKDAE 360 KRMFPAATRS SDLSMSIGLQ GENWNIDSKG RDTDGSFLGR TNSRADSAKV EGVKVSQGYR 420 SVPCFAAKLD LNAHDDNDTS SSCRHLDWIG LDWASGGIES VEMEVPSSWD ALRKQMLDIS 480 ITALNSATRR VLIALVFSFC SSCRQARKLE AQLDEQMNSY RKFVSAKGST KVGTAENDLE 540 SGIDRLLKQL QQVNSQMQAW VSSGGSEMVS HTLTRHQEIF QDITQEFYRL RNSLRAKQEH 600 ASLLEDFREF DRTRVDLEDG AENALLKEHA AVSRSTGQVD TVISQAQATL GALVIQRSTF 660 GGINSKLSNI GSRLPTVPLE WN

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MMYHHQLQHH RQNHRQHQHQ HQHQHQHQHQ GKNIIHSSAS SSRISMPNIP SERILFLQQG  60
DQNSPAGDSG LVLSTDAKPR LKWTLDLHER FIEAVNQLGG ADKATPKTVM KLMGIPGLTL  120
YHLKSHLQKY RLSKNLHGGH VTSGPTKIGT GTVPVPVAGE SLISEANGSQ MSTMSIGIAP  180
QSNKGLHLNE TLEMQIEVQR RLHEQLEVQR HLQLRIEAQG KYLQSVLEKA QETLGRQNLG  240
TVGLEAAKVQ LSELVSKVSL NSAFTELKEL QGLCPQKTQT NQQPTDCSID SCLTSCEVSR  300
RDQDQIHSSG MPLRPNYNGR AAALLEHKEA AQDQRPILQN TQLNWCDDNM FRSPISKDAE  360
KRMFPAATRS SDLSMSIGLQ GENWNIDSKG RDTDGSFLGR TNSRADSAKV EGVKVSQGYR  420
SVPCFAAKLD LNAHDDNDTS SSCRHLDWIG LDWASGGIES VEMEVPSSWD ALRKQMLDIS  480
ITALNSATRR VLIALVFSFC SSCRQARKLE AQLDEQMNSY RKFVSAKGST KVGTAENDLE  540
SGIDRLLKQL QQVNSQMQAW VSSGGSEMVS HTLTRHQEIF QDITQEFYRL RNSLRAKQEH  600
ASLLEDFREF DRTRVDLEDG AENALLKEHA AVSRSTGQVD TVISQAQATL GALVIQRSTF  660
GGINSKLSNI GSRLPTVPLE WN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-117	G2-like family protein