PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017877.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 289aa MW: 30455.5 Da PI: 9.2582

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017877.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.4	4.4e-37	37	169	2	114
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........... 88 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s ++n ss+ PCP017877.1 37 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSLRGGNTSSSapssttssdhk 133 78**************************************************************99999666.3333333333333333444455667 PP TCP 89 .........................kaaksaakskksqksaasalnlakes 114 + ++++ + ++ s PCP017877.1 134 pqllgptpfilgkrvrgslddpenhS------HNHN---------HNHDAS 169 78888888887655544432221110......1111.........111122 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MSNSEAPNNE LTNGGGGGAG AMVEQTSQRP SSNGVLAVKK PPSKDRHSKV DGRGRRIRMP 60 IICAARVFQL TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPASFSTV SVSLRGGNTS 120 SSAPSSTTSS DHKPQLLGPT PFILGKRVRG SLDDPENHSH NHNHNHDASA AKDPSDNHAN 180 NDGAVSVVGH SMASMLGPNA GGPGGFWAPH FGQVWSFAAT PPPELMAQSA LSHQQQQQHH 240 QQHSLFLQQQ PMGEASAARV GNYLPGHLNL LASLSGGHGN SGRREDDQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	4e-67	TCP family protein