PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017870.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 260aa    MW: 28329.1 Da    PI: 10.442
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017870.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.3e-31184242259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   D+++WrKYGqK++kgs++pr+YYrC++  gCp++k+ver+++dpk++++tYe eH+h+
  PCP017870.1 184 ADEFTWRKYGQKPIKGSPYPRGYYRCSTVrGCPARKHVERAQDDPKMLVVTYEAEHRHP 242
                  69************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MAIDLVGFSK IDDRTAVQEA ASAGLQSMQH LIRTLSNQTP SHTPLDCREI TDFTVTKFKH  60
LISVLNRTGH ARFRRGPPKP ASDSVHPKPQ TTLTAFQTPK SDKDNSTTVS PPVSTTSSFF  120
SSNTIGDGSV SNGKPFSSIS VPTPPAFSAR KTAPSTVSPE TVKCKVKRTI RVPAISSKTA  180
DIPADEFTWR KYGQKPIKGS PYPRGYYRCS TVRGCPARKH VERAQDDPKM LVVTYEAEHR  240
HPHPCPSLTA ANVGPVFQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-82WRKY family protein