PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP017426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 30053 Da PI: 5.1439 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.8 | 6e-30 | 54 | 112 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+ +Hnh+ PCP017426.1 54 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTCSHNHS 112 699***********************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDATLSPEPD SDVSKELRPE TQSSKRRKLA HEKTVVTVKI GANVGKLKNE GPPSDLWSWR 60 KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERSKTDASV LIITYTCSHN HSGPPDVNVI 120 STTQQEHDQK QEQEQEQEQE QEQEQEQDQK QDQKQEQEQE HRKLEEHFHY IESPVRSSRE 180 EEHIFIAHDT SFGFLLDEKQ EPLSLSYSQL MSFSTPKLSE ENNDFFDELE ELPTFSSFPS 240 FMRRTNNLSF GIERIPSVPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-35 | WRKY family protein |