PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017250.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 358aa MW: 40526 Da PI: 5.2972

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017250.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.9e-08	308	340	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + PCP017250.1 308 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 340 69*****************************87 PP
2	ELK	29.1	2.2e-10	261	282	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PCP017250.1 261 ELKHELKQGYKEKIVDIREEIL 282 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAFHHHHQQT PHEMAFHSFA ADQPTLSGAP TWLNNAAFRQ QNTSFGGLHD AGRNDDVVIS 60 PSGKSSNCSD RNRREISGYD GGEEEEGEDE LECESARFKA DIVEHPLYEQ LVSAHVSCLR 120 IATPVDQLPR IDEQLVQSQR VVDKYSGANG DVGVMDEKDL DLFMTNYVLL LCSFKEQLQQ 180 HVRVHAMEAV MACWELDQSL QSLTGVSTGE GTGATMSDDD DQVDSDINSY DGSLDGPDTM 240 GFGPLVPTES ERSLMERVRQ ELKHELKQGY KEKIVDIREE ILRKRRAGKL PGDTTSVLKS 300 WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR NWHSNISSTS VPKSKRKR

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAFHHHHQQT PHEMAFHSFA ADQPTLSGAP TWLNNAAFRQ QNTSFGGLHD AGRNDDVVIS  60
PSGKSSNCSD RNRREISGYD GGEEEEGEDE LECESARFKA DIVEHPLYEQ LVSAHVSCLR  120
IATPVDQLPR IDEQLVQSQR VVDKYSGANG DVGVMDEKDL DLFMTNYVLL LCSFKEQLQQ  180
HVRVHAMEAV MACWELDQSL QSLTGVSTGE GTGATMSDDD DQVDSDINSY DGSLDGPDTM  240
GFGPLVPTES ERSLMERVRQ ELKHELKQGY KEKIVDIREE ILRKRRAGKL PGDTTSVLKS  300
WWQSHSKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR NWHSNISSTS VPKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	338	358	RKRNWHSNISSTSVPKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11060.1	1e-149	TALE family protein