PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP017064.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1753aa MW: 197416 Da PI: 6.8763

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP017064.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.4	1e-22	1133	1224	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+ +++++ HnHel PCP017064.1 1133 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgASQWYASQFSNVHNHELL 1224 69******************8888.**************************************99877789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1753 aa Download sequence
MFRCFLSFTP SRSHRKLPHR SNPALTTSAA ASPAVSSPPR ASLFFQSQNP TRHLIPFKSL 60 ADQYTSSEPQ IKTQDLDHAS NGAYGYLATR FRDSRTSNDA HNFHLQICKL GFANDLFLCN 120 TLINVYVRSG ALVEAGMLFE EMPDKNSVTW ACLISGYTQN GMPNEACAHF KRMVSGGFSP 180 SPYAFGSVLR ACQESGPSKL KFGMQTHGLI SKTDHASDMV MANVLMSMYG KCSGPVDDAY 240 RVFCEIKIRN SISWNSIISV YCQRGDAVSA YKLFSSMQKD CAGFSLKPNE YTFGSLITAA 300 CSLAGSGLSL LQQMLTSIKK SGILQDLYVG SALVSGFARF GLIDYARNIF EQMSQRNAVS 360 MNGLMVALVR QKRGEEATEV FMEMKDLVGT NLDSLVVLLS SFPEFLVLEE GKRRGREVHA 420 YVIGAGLIYR KVAIGNGLVN MYAKCGAIND ACSVFRHMVD KDLISWNSLI SGLDQNKRFE 480 DAVMNFRDMR RSELMPSNFT LISALSSCAS LGWIMLGQQI HCEALKLGLD FDVSVSNALL 540 ALYSDTGYLS ECRNVFFLMQ EYDQVSWNSI IGALAGSEAS EAVHYFLDMM QSGWELNRVT 600 LLSILSAVSS LLLPELGQQI HAVVLKYNAI EDCAIENALI TFYGKCGGID DCERIFSRMS 660 ERRDEISWNA MISGYIHNEL LPKAMDLVWF MMQRGQRLDS FTFATVLSAC ASIATLERGM 720 EVHACGIRAC LESDVVVGSA LVDLYSKCGR IDYASRFFES MPVKNAYSWN SLISGYARNG 780 QGQEALRLFA QMKQQGQMPD HVTFVGVLSA CSHAGMVDEG FHHFESMTKV HGLAPRMEHF 840 SCMVDLLGRA GKLNMIEDFI NKMPMKPNVL IWRTVLGACG RASGCNTELG RRAAEMLLEL 900 EPQNATNYVL LANMYASGGK WDDVAKARMA MRKASAKKEA GCSWVTMKDG VHVFVAGDKS 960 HPEKDLIYDK LKELNGKMRD AGYVPETKFA LYDLEQENKE ELLSYHSEKL AVAYVLTRPS 1020 QLPIRIMKNL RVCGDCHTAF KYISKIVDCL GEGYWKTYCV SLTMAMKPSN IWLRRQQCPC 1080 GDWKCYIKYE GDDLTSVSSQ HVKSEIAQSS SSSEAVFTPY VGQIFKTDDD AFEYYSNFAR 1140 KNGFSIRKAR STESQNLGVY RRDFVCYRSG FNQPRKKANV EHPRERKSVR CGCDAKLYLT 1200 KEIVDGASQW YASQFSNVHN HELLEDDQVR LLPAYRKIQE ADQERILLLS KAGFPVNRIV 1260 KVLELEKGVQ PGQLPFIEKD VRNFVRTCKK TVQENDALLN EKRENDMLEL LEACKAMTER 1320 DPDFVYDYSV DENEKVENIT WSFGDSIRAY NVFGDVVALD TAYRSVTYGL LLGVWFGIDN 1380 HGKAIFLGCV LLQDESSHAF AWALQAFMRF MRGRHPQTIL TDIDSGLTDA IASKLPNSKH 1440 VICIWHILSK ISSWFSLPIG SQYENFKAEF DMLSHLENVE DFEHQWNILV ARFGLVSDKH 1500 VDLLYSYRAS WASSYIRSSF LARTLTAEFS SSLESFLKRI LNGQTCLQVF FEQVSIAANF 1560 ENQTREGMQY MHVKTGMPLE EHARNILTPY AFNVLQREIV LSEQYAATDL GNGSYLLRHY 1620 KKLDGECLVI WMDDEQIHCS CKEFEHSGIL CRHSLRVLVM KNYFQLPEKY FLLRWRLESS 1680 LVSLDDQNAQ ISSDECARAF HGLTDTLLTE SLISKDRFNY VHSELTSLLE HVRKMPVIDE 1740 YAAIAAATNI SES

Sequence ? help Back to Top

Protein Sequence Length: 1753 aa Download sequence

MFRCFLSFTP SRSHRKLPHR SNPALTTSAA ASPAVSSPPR ASLFFQSQNP TRHLIPFKSL  60
ADQYTSSEPQ IKTQDLDHAS NGAYGYLATR FRDSRTSNDA HNFHLQICKL GFANDLFLCN  120
TLINVYVRSG ALVEAGMLFE EMPDKNSVTW ACLISGYTQN GMPNEACAHF KRMVSGGFSP  180
SPYAFGSVLR ACQESGPSKL KFGMQTHGLI SKTDHASDMV MANVLMSMYG KCSGPVDDAY  240
RVFCEIKIRN SISWNSIISV YCQRGDAVSA YKLFSSMQKD CAGFSLKPNE YTFGSLITAA  300
CSLAGSGLSL LQQMLTSIKK SGILQDLYVG SALVSGFARF GLIDYARNIF EQMSQRNAVS  360
MNGLMVALVR QKRGEEATEV FMEMKDLVGT NLDSLVVLLS SFPEFLVLEE GKRRGREVHA  420
YVIGAGLIYR KVAIGNGLVN MYAKCGAIND ACSVFRHMVD KDLISWNSLI SGLDQNKRFE  480
DAVMNFRDMR RSELMPSNFT LISALSSCAS LGWIMLGQQI HCEALKLGLD FDVSVSNALL  540
ALYSDTGYLS ECRNVFFLMQ EYDQVSWNSI IGALAGSEAS EAVHYFLDMM QSGWELNRVT  600
LLSILSAVSS LLLPELGQQI HAVVLKYNAI EDCAIENALI TFYGKCGGID DCERIFSRMS  660
ERRDEISWNA MISGYIHNEL LPKAMDLVWF MMQRGQRLDS FTFATVLSAC ASIATLERGM  720
EVHACGIRAC LESDVVVGSA LVDLYSKCGR IDYASRFFES MPVKNAYSWN SLISGYARNG  780
QGQEALRLFA QMKQQGQMPD HVTFVGVLSA CSHAGMVDEG FHHFESMTKV HGLAPRMEHF  840
SCMVDLLGRA GKLNMIEDFI NKMPMKPNVL IWRTVLGACG RASGCNTELG RRAAEMLLEL  900
EPQNATNYVL LANMYASGGK WDDVAKARMA MRKASAKKEA GCSWVTMKDG VHVFVAGDKS  960
HPEKDLIYDK LKELNGKMRD AGYVPETKFA LYDLEQENKE ELLSYHSEKL AVAYVLTRPS  1020
QLPIRIMKNL RVCGDCHTAF KYISKIVDCL GEGYWKTYCV SLTMAMKPSN IWLRRQQCPC  1080
GDWKCYIKYE GDDLTSVSSQ HVKSEIAQSS SSSEAVFTPY VGQIFKTDDD AFEYYSNFAR  1140
KNGFSIRKAR STESQNLGVY RRDFVCYRSG FNQPRKKANV EHPRERKSVR CGCDAKLYLT  1200
KEIVDGASQW YASQFSNVHN HELLEDDQVR LLPAYRKIQE ADQERILLLS KAGFPVNRIV  1260
KVLELEKGVQ PGQLPFIEKD VRNFVRTCKK TVQENDALLN EKRENDMLEL LEACKAMTER  1320
DPDFVYDYSV DENEKVENIT WSFGDSIRAY NVFGDVVALD TAYRSVTYGL LLGVWFGIDN  1380
HGKAIFLGCV LLQDESSHAF AWALQAFMRF MRGRHPQTIL TDIDSGLTDA IASKLPNSKH  1440
VICIWHILSK ISSWFSLPIG SQYENFKAEF DMLSHLENVE DFEHQWNILV ARFGLVSDKH  1500
VDLLYSYRAS WASSYIRSSF LARTLTAEFS SSLESFLKRI LNGQTCLQVF FEQVSIAANF  1560
ENQTREGMQY MHVKTGMPLE EHARNILTPY AFNVLQREIV LSEQYAATDL GNGSYLLRHY  1620
KKLDGECLVI WMDDEQIHCS CKEFEHSGIL CRHSLRVLVM KNYFQLPEKY FLLRWRLESS  1680
LVSLDDQNAQ ISSDECARAF HGLTDTLLTE SLISKDRFNY VHSELTSLLE HVRKMPVIDE  1740
YAAIAAATNI SES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein