PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 26965.4 Da PI: 8.2104 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.7 | 3.1e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +lv +++++G +W+ ++ g+ R++k+c++rw +yl PCP016737.1 16 KGPWSPEEDHKLVAYIQRYGIWNWSQMPKPAGLARSGKSCRLRWVNYL 63 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.3e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+e ++++++ G++ W++Ia++++ gRt++++k++w++++ PCP016737.1 69 RGNFSKDEEETILELHQAIGNR-WSAIAARLP-GRTDNEIKNYWHTHM 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MAKRTQRCEK TVAVKKGPWS PEEDHKLVAY IQRYGIWNWS QMPKPAGLAR SGKSCRLRWV 60 NYLRPDIKRG NFSKDEEETI LELHQAIGNR WSAIAARLPG RTDNEIKNYW HTHMKKRFKA 120 AIESVHEEAK GSGDKEASKN KLSEAGQLFL VDEATKVTSL KLEATCSASS SVFFPVWEVD 180 DRKGQIAEQS VCASDVTFGE LQSLDSQVWQ QEPIFPCDSY INHVTSDYWV SLIDKTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-57 | MYB family protein |