PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016396.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 543aa MW: 61051 Da PI: 6.2717

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016396.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.9	1.6e-11	455	506	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr ++NRe+ArrsR RKk+ +e +++v+ L+ eN ++k++l +++ PCP016396.1 455 RKRRRTMSNRESARRSRWRKKKHLEDMTNEVERLKIENLEMKNRLGVVAQKC 506 577999************************************9998887777 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MVKKHSSLLG KTVIVADEDD TSDVELDHRF WHDMLDLYFV RGKDSRGRQD DDLVFFVRKL 60 SSYGYGFNDG KEGVSPYFVR RWAHKLDDLI GESNVDVDWR RSFYLNLIAH TSFTVTVAIC 120 SHQDLRNHQA DQGIPLSPIY KEVETTPAYP DICFAIDDFD STFDAVVLTE TDNCYCVILN 180 AHDGAAFPRV KESDECSSGD SSSLRIETNS AKMKNTKLTL FSGFVSYQMV RDAYDAGKSR 240 FGNLLGHSPG KTDKLYMKGP GGRGEVEVAV SGVADQSQQD LGPFSPVISK TGFGIGSIVR 300 KAASVASVAA KNAYAAASST HSFDDEMVPL KCCLMSISLP WEQIAYDLLF KGTPPVTLVD 360 PMCHFSFDHK NSAPPLRSFP FLFLPSLPFT QMMMSSSAMF FNHEPAHMGH FECPVQETEL 420 TTAEIQELLS LLQAGNSASP SSEGSNREVY TVDERKRRRT MSNRESARRS RWRKKKHLED 480 MTNEVERLKI ENLEMKNRLG VVAQKCHVTW RENDRLTSES LALCARLSDL YRILIAMEMQ 540 YSQ

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MVKKHSSLLG KTVIVADEDD TSDVELDHRF WHDMLDLYFV RGKDSRGRQD DDLVFFVRKL  60
SSYGYGFNDG KEGVSPYFVR RWAHKLDDLI GESNVDVDWR RSFYLNLIAH TSFTVTVAIC  120
SHQDLRNHQA DQGIPLSPIY KEVETTPAYP DICFAIDDFD STFDAVVLTE TDNCYCVILN  180
AHDGAAFPRV KESDECSSGD SSSLRIETNS AKMKNTKLTL FSGFVSYQMV RDAYDAGKSR  240
FGNLLGHSPG KTDKLYMKGP GGRGEVEVAV SGVADQSQQD LGPFSPVISK TGFGIGSIVR  300
KAASVASVAA KNAYAAASST HSFDDEMVPL KCCLMSISLP WEQIAYDLLF KGTPPVTLVD  360
PMCHFSFDHK NSAPPLRSFP FLFLPSLPFT QMMMSSSAMF FNHEPAHMGH FECPVQETEL  420
TTAEIQELLS LLQAGNSASP SSEGSNREVY TVDERKRRRT MSNRESARRS RWRKKKHLED  480
MTNEVERLKI ENLEMKNRLG VVAQKCHVTW RENDRLTSES LALCARLSDL YRILIAMEMQ  540
YSQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	455	459	RKRRR
2	455	460	RKRRRT
3	455	476	RKRRRTMSNRESARRSRWRKKK
4	456	477	RKRRRTMSNRESARRSRWRKKK
5	457	478	RKRRRTMSNRESARRSRWRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59530.1	2e-24	bZIP family protein