PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016374.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 397aa MW: 45016.8 Da PI: 6.4648

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016374.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	325	359	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ PCP016374.1 325 KWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 359 669*****************************885 PP
2	ELK	37.8	4.2e-13	279	300	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s PCP016374.1 279 ELKNHLLRKYSGYLSSLKQELS 300 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEDYNNQMDH ESSGGRGNFL YASPNLGGNY GRAASDHQMG INTFHLQSSG GGGGGGSGDQ 60 CNFQSPGTHP INVKTEATTS QHGHQKFQYN NNNNNHLVSS SRGHQPVVHQ LQNNLNLLND 120 DHSLSSNEVE AIKAKIIAHP QYSNLLEAYM DCQRVGAPSD VMARLSVARQ EFEARQRSSG 180 TSRETSKDPE LDQFMEAYYD MLVKYREELT RPIQEAMDFM RRIETQLNML GNNNNAPPLR 240 IFSPSEDKCE GIGSSEEEQE NSGGETEVPE IDPRAEDREL KNHLLRKYSG YLSSLKQELS 300 KKKKKGKLPK DARQKLLSWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW 360 KPSEDMQFMV MDGLHPQNAA LYMDGHYIGD GHYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEDYNNQMDH ESSGGRGNFL YASPNLGGNY GRAASDHQMG INTFHLQSSG GGGGGGSGDQ  60
CNFQSPGTHP INVKTEATTS QHGHQKFQYN NNNNNHLVSS SRGHQPVVHQ LQNNLNLLND  120
DHSLSSNEVE AIKAKIIAHP QYSNLLEAYM DCQRVGAPSD VMARLSVARQ EFEARQRSSG  180
TSRETSKDPE LDQFMEAYYD MLVKYREELT RPIQEAMDFM RRIETQLNML GNNNNAPPLR  240
IFSPSEDKCE GIGSSEEEQE NSGGETEVPE IDPRAEDREL KNHLLRKYSG YLSSLKQELS  300
KKKKKGKLPK DARQKLLSWW ELHYKWPYPS ESEKVALAES TGLDQKQINN WFINQRKRHW  360
KPSEDMQFMV MDGLHPQNAA LYMDGHYIGD GHYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-126	TALE family protein