PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016159.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WRKY | ||||||||
Protein Properties | Length: 241aa MW: 26979.9 Da PI: 6.1605 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 76.8 | 2.5e-24 | 180 | 225 | 1 | 46 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk 46 ldDg++WrKYG+K+vk+s++pr+YY+C+ +gC vkk+ver++edp+ PCP016159.1 180 LDDGFKWRKYGKKVVKNSPHPRNYYKCSVEGCLVKKRVERDREDPR 225 59******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MKREPISFTL RSVIDVFYWI SLLVVVDALT TKRGDNEGGG VNERLVNQSQ LLVELDGGNE 60 RRGVFVFSAT NRLYGAHVHF KSQKQQSAES PETNDFSDNS NFEFSEFLMI GEWLDGDPSS 120 VASELSVQNS GFQANEADES GAGSSQPGGS TSRGESGSSR ERQETRERVA FKTKSEVEIL 180 DDGFKWRKYG KKVVKNSPHP RNYYKCSVEG CLVKKRVERD REDPRHPVLS CVMDIKKADA 240 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 6e-34 | WRKY family protein |