PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 258aa MW: 28740.1 Da PI: 8.0594 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.7 | 8.8e-05 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k F++ L H++ H PCP016004.1 69 YACNSCDKAFPTTQALGGHQNAH 91 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MLNFMFKSPS MFNNSRSSAH RSTIAPCNRS PSISPCNPIT SDTSISMMYP MSPILGSCLY 60 FHNHGSCKYA CNSCDKAFPT TQALGGHQNA HRKERNDLRA NEVARAAQEN LRFRPYVFPH 120 DPWRWAPPSI YNDFINKTKP RMRSYDFYHF LGMAGDCNPK WGAGLGFGSG SKRKKRGYDH 180 NDDAEADSDK KKGKYVGVVD DLKVSMSNVT LSLATGSGDV EKSDSGLDWE DGEYMYVVGG 240 DGEASTSRTE ELDLNLKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 172 | 194 | KRKKRGYDHNDDAEADSDKKKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 3e-08 | C2H2 family protein |