PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015881.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 294aa MW: 33321 Da PI: 4.8951

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015881.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.3	2e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ + G +W+++++ g+ R++k+c++rw +yl PCP015881.1 14 KGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLCRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	70	111	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia +++ gRt++++k++w+++ PCP015881.1 70 LTEAEEQLVIDLHARLGNR-WSKIAGRLP-GRTDNEIKNHWNTH 111 699**************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLISFIL TNGQCCWRAV PKLAGLCRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIAGRLPGRT DNEIKNHWNT HIKKKLLRMG 120 IDPVTHEPLH KEEELPSNIK ENNSSSSSHD HSDHENNLPA DKYINGLHNS QENDQSVVNS 180 SGSEDINSST ENSSTGAESV LLDSICNDKL LMNTLWMDET PRIDALWNDK NQVELDQGGI 240 NYNITENNGM GFQSNWDDNW TWLLDCQDFG IHDFGMDCFS NVEVNGINTL EVDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	5e-98	MYB family protein