PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015860.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 417aa    MW: 47477.8 Da    PI: 9.3522
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015860.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.4e-16696298
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                 f +l+ s++l+ ++l++p +f++++ ++   s+  tl+ ++g +W v +  +k ++++++ +GW++F +   +++g  ++F+++grs+f  +v++f+
  PCP015860.1  6 FHKLIVSSTLQAKQLRIPESFVQKFRNE--LSTIATLTVPDGHVWHVGV--KKVDNKFWFHGGWQDFIEHYSIRVGYLLTFRYEGRSSF--TVHIFN 96
                 56777888899999********999744..8899***************..**************************************..888875 PP
2B362.66.6e-20303393498
                  E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  vl ps+  + ++++lp  fae++ +g++     ++l++ +gr+W+v++ yr+++    l++GW eF  +n+L egD++vF+l + ++  l+v+vfr
  PCP015860.1 303 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSADGRQWSVRCLYRGGR--AKLSQGWYEFTMDNNLGEGDVCVFELLKMKDIVLKVTVFR 393
                  78899******************877743...5***************665555..66***********************998899999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MRPPYFHKLI VSSTLQAKQL RIPESFVQKF RNELSTIATL TVPDGHVWHV GVKKVDNKFW  60
FHGGWQDFIE HYSIRVGYLL TFRYEGRSSF TVHIFNLKTA EINYQPNTLS STGGSVDRYQ  120
VFEEMEDDDS VEILGSSPTS VVTDSLRDKC FGGSTNQLTP GKNCTPPSLQ NLFNGSKPKN  180
YVNWSDAGNL HLSKGDDLQA GNESTRDIGV QFNVTELKKT VDEVKLRSPG EDIRSIKKTV  240
RKKRKVNPNV EESSSQHEKE VEIRFRFYES ASARKRTVTA EERERAINAA KTFEPVNPFC  300
RVVLRPSYLY RGCIMYLPSC FAEKNLNGVS GFIKLQSADG RQWSVRCLYR GGRAKLSQGW  360
YEFTMDNNLG EGDVCVFELL KMKDIVLKVT VFRVLEDAGF VNQPQLQNLT PAKPNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-134B3 family protein