PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015586.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 1419aa    MW: 160789 Da    PI: 5.9758
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015586.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.24.9e-1024007472350
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                   +lL++cA+av+s d++ a++ L+++++ +sp+gd+ qRla+yf+ +L+arl + ++  y+ l  +++s    +e l+a+++ +  sP+   sh++aN
  PCP015586.1 400 STLLTQCAQAVASYDQQTARERLQKIRHYSSPRGDAKQRLAHYFADGLEARLDGATTPSYSFLVGTQSS---AAEILKAFQVSVSSSPFKHTSHFVAN 494
                  579***************************************************99999*999999998...9************************* PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                  ++I++  e+++r+Hi+Df+i +G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eet+ rL+k+Ae+++vpfe nv +a+++e++++e+L+
  PCP015586.1 495 RTIMKLSENATRLHIVDFGIDYGFQWPCFIQHLSERPGGPPKLRITAIELPQPGfrPTERVEETACRLKKYAERFNVPFECNV-IAQKWETIKFEDLK 591
                  *****************************************************9****************************9.7************* PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                  ++++E +aVn++++l++++de+  l+s  +rd vLkl+++++P+v+++   +  ++++ F++rf eal +ysalfd +ea++pre+e r   E+++ g
  PCP015586.1 592 TDRNEPTAVNCMFRLKNIPDETEMLSSasPRDIVLKLIRKINPDVFIHGIVNGTYTAPFFATRFREALFHYSALFDIFEATVPREDEMRLLFEKAVYG 689
                  ********************9988877779******************************************************************** PP

         GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                  r+ivnv+aceg er+er et+++W+ r  +aGFk++pl+++  kq++++l    ++g++
  PCP015586.1 690 RDIVNVIACEGLERVERPETYKQWQFRNVRAGFKQLPLDQELLKQVRRILYAP-MEGFE 747
                  ************************************************99643.36665 PP
2GRAS372.65.2e-114104714152372
         GRAS    2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97  
                    +lL+ecAeav+s d+++a++lL+++++++sp+g+++qRla+yf+ +L+arla+  +  y  + + +      +e l+a+++++ ++P+ k+ h+ 
  PCP015586.1 1047 CKLLTECAEAVASYDQQAASELLKQIRQHSSPYGESTQRLAHYFADGLEARLAGARTPSYCPIMMHSP----ATEILKAYQVYVTACPFKKMVHFF 1138
                   589***************************************************44444433333333....579********************* PP

         GRAS   98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlel 191 
                   aN++I++ +e+++r+HiiDf+is+GlQWp+L+q+L+++++gpp+lRiT ++ p++g   +e++eet++rL+k++e+ +vpfe+nv +ak++e+++l
  PCP015586.1 1139 ANRTIMKTAEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITLIELPQPGfrPAERIEETARRLTKYCERYNVPFEYNV-LAKKWETIRL 1233
                   *******************************************************9*****************************.6********* PP

         GRAS  192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287 
                   e++r++++E+++Vn++++l++++de+v  +++rd+vL+l+ksl+P+++v+   +  +n++ F+ rf +al ++ a+fd++ea++p+e+e+r++ Er
  PCP015586.1 1234 EDFRIDRNEVTVVNCMHRLKHMPDETVMANNPRDAVLNLIKSLNPDLFVHGVVNGTYNAPAFVVRFKQALFHFYAFFDMYEATVPHEDEQRMFFER 1329
                   ************************************************************************************************ PP

         GRAS  288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372 
                   +++gr+i+nv+aceg er+er et+++W++r  + GFk++pl+ +  k++k++ + ++  + +r+e++ +++++gWk+r +++++a
  PCP015586.1 1330 AIFGRDIMNVIACEGLERVERPETYKQWQARYARIGFKQLPLDRELLKKVKTMSKVMGyHRDFRIEDDGQWMLQGWKGRIVIALTA 1415
                   ******************************************************99999999*******************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1419 aa     Download sequence    
MTTDAGTNWS LLEDVALCTS WVEVTHSLLT EVFMNITPLH STLNHGSHVH EDDAEEVPET  60
PFPEQASSST RYPIRPQGKK TSKRKGSASK NDYAKFMEEL ARQGELTLAM EMAKYDADKA  120
RDDAKAAAIE REFQANERER ELFSWVKFLS DGDSTDPGDF NHPVLKYISD ILLEEDLEGK  180
PCMLQDCLAL QAAEKSFFDV LNPRGPPSPN QPPFSHSLEN PDDDSTPSSH SCNGTSIPSE  240
TSHFQSYLVE SQSDNVLVSD PLSEMQSFGH FGGVGEACKF LPNESFGTID LERCHLMSPG  300
PDPCPPGIRT LMRKPENDGH NSTNILKGKK HHQREDGDYP EEGRSSKQPV AFADDSEPQE  360
MFDEVLLSHG RHHFGNKQSK GSKTTRSKKQ NSNAEIVDLS TLLTQCAQAV ASYDQQTARE  420
RLQKIRHYSS PRGDAKQRLA HYFADGLEAR LDGATTPSYS FLVGTQSSAA EILKAFQVSV  480
SSSPFKHTSH FVANRTIMKL SENATRLHIV DFGIDYGFQW PCFIQHLSER PGGPPKLRIT  540
AIELPQPGFR PTERVEETAC RLKKYAERFN VPFECNVIAQ KWETIKFEDL KTDRNEPTAV  600
NCMFRLKNIP DETEMLSSAS PRDIVLKLIR KINPDVFIHG IVNGTYTAPF FATRFREALF  660
HYSALFDIFE ATVPREDEMR LLFEKAVYGR DIVNVIACEG LERVERPETY KQWQFRNVRA  720
GFKQLPLDQE LLKQVRRILY APMEGFEFGD GSNLVYSDEN LADGFRENHE STNPNYFQSN  780
LDHPSDLSTS LIPGSDAVTI DTNDCNQPVL KYISDILLEE DLEGKPCMLQ ESLALQVAEK  840
YFYDALNPED PPLLNQPSFS VCQSFENSDV GCHSSDGSIA SFPSSNGSIS ANRGWVWDLS  900
QPSHGIKFLP NESCETIDLE RDQLVPPCSD QWPPGPYTLI GNLASENDGY NSINGPKGKK  960
NHRREDGYDA EEGRRNKQSA AASDNSDLQE IYDTVLQSVN HEPDSCLHDE SSKTKGNRML  1020
QHKEQSKRSK SLRAKKQNSN RKVVDLCKLL TECAEAVASY DQQAASELLK QIRQHSSPYG  1080
ESTQRLAHYF ADGLEARLAG ARTPSYCPIM MHSPATEILK AYQVYVTACP FKKMVHFFAN  1140
RTIMKTAEKA TRLHIIDFGI SYGLQWPCLI QSLSEKTGGP PNLRITLIEL PQPGFRPAER  1200
IEETARRLTK YCERYNVPFE YNVLAKKWET IRLEDFRIDR NEVTVVNCMH RLKHMPDETV  1260
MANNPRDAVL NLIKSLNPDL FVHGVVNGTY NAPAFVVRFK QALFHFYAFF DMYEATVPHE  1320
DEQRMFFERA IFGRDIMNVI ACEGLERVER PETYKQWQAR YARIGFKQLP LDRELLKKVK  1380
TMSKVMGYHR DFRIEDDGQW MLQGWKGRIV IALTALKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-158GRAS family protein