PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015504.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 617aa MW: 67186.1 Da PI: 7.0612

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015504.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	231	288	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkg efprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k PCP015504.1 231 DDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 288 8**************************************.*************85 PP
2	WRKY	106.1	1.8e-33	406	464	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PCP015504.1 406 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 464 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MDATALGHPS GPSDGVDQGL TDFQPGSDPT LFSSSAAASG GAKYKLMSPA KLPISRSPCL 60 TIPHGLSPTS FLESPVLLSN MKAEPSPTTG SFLKPQMVYG SLSSTTYSAT TVCSDFNTSD 120 ERNSGSFEFK PHARSNMVTT DYNHYGNEQP LQIQGQAQPQ SHMSPPLAKN EMAVSSNEFS 180 LSAPVRTVTA GASAPAEGDS GELTQREHPN PGVQTSQCDN KGNGPSVISS DDGYNWRKYG 240 QKHVKGCEFP RSYYKCTHPN CEVKKLFERS HDGQITEIIY KGTHDHPKPQ PSRRYNTGAM 300 MPPQEERSDK ASSLTVRDDK PSGIYGQMSS NNEPSSTPEL SPVTGNDDNV EGTGSLSNRL 360 PDEVDDDDPF SKRRRTDVGG IDVTPIVKPI REPRVVVQTL SEVDILDDGY RWRKYGQKVV 420 RGNPNPRSYY KCTNAGCPVR KHVERASHDP KAVITTYEGK HNHDVPTAKT SSHDASGPTT 480 VNVPSRIRSE ESDTISLDLG VGTTSGGENR SNEHMQLHSE LVERQSRTNS NFRVAQNTPI 540 STYYGVLIGG TNQYGSRENP SESRSIEVPP LNHSSYPYPQ NMGRVLTADK VFINVDARST 600 IHRKVMVSKM SCSGALS

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MDATALGHPS GPSDGVDQGL TDFQPGSDPT LFSSSAAASG GAKYKLMSPA KLPISRSPCL  60
TIPHGLSPTS FLESPVLLSN MKAEPSPTTG SFLKPQMVYG SLSSTTYSAT TVCSDFNTSD  120
ERNSGSFEFK PHARSNMVTT DYNHYGNEQP LQIQGQAQPQ SHMSPPLAKN EMAVSSNEFS  180
LSAPVRTVTA GASAPAEGDS GELTQREHPN PGVQTSQCDN KGNGPSVISS DDGYNWRKYG  240
QKHVKGCEFP RSYYKCTHPN CEVKKLFERS HDGQITEIIY KGTHDHPKPQ PSRRYNTGAM  300
MPPQEERSDK ASSLTVRDDK PSGIYGQMSS NNEPSSTPEL SPVTGNDDNV EGTGSLSNRL  360
PDEVDDDDPF SKRRRTDVGG IDVTPIVKPI REPRVVVQTL SEVDILDDGY RWRKYGQKVV  420
RGNPNPRSYY KCTNAGCPVR KHVERASHDP KAVITTYEGK HNHDVPTAKT SSHDASGPTT  480
VNVPSRIRSE ESDTISLDLG VGTTSGGENR SNEHMQLHSE LVERQSRTNS NFRVAQNTPI  540
STYYGVLIGG TNQYGSRENP SESRSIEVPP LNHSSYPYPQ NMGRVLTADK VFINVDARST  600
IHRKVMVSKM SCSGALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein