PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015468.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 424aa MW: 47504.8 Da PI: 7.2808

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015468.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.5e-33	126	182	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d+++++i+Y+g+Hnh+ PCP015468.1 126 DDGFNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITQIVYKGNHNHH 182 8**************************************.*************8 PP
2	WRKY	107.1	8.7e-34	290	348	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k+ver+++d+++v++tYeg+Hnh+ PCP015468.1 290 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSVGCPVRKHVERASQDTRAVITTYEGKHNHD 348 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MFLSYNLESP TTGAFSSQVF DWMNDTKDTQ QGIKDREEPK MFSDFSFQPE SRPATNLQSS 60 SSMVSVEEPF KRERQAWDFN AEKAGVKSEF EPIEANTQSN ELNGAPKSDY LHSNQSSQYA 120 REQKSDDGFN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERSLDGQI TQIVYKGNHN 180 HHKPQSTRRS SSNSIQGSFY GISDQSVPTL SNPKVESVSL QEDSSTSIGE DEFEQNSPIS 240 NSVGAEDENE PEAKRWKGDN ANDQSYASSG GRIVKEPRIV VQTTSEIDIL DDGYRWRKYG 300 QKVVKGNPNP RSYYKCTSVG CPVRKHVERA SQDTRAVITT YEGKHNHDVP AARGSGNYSN 360 ASRPAADNNS NNVSMAVRPL ALPNHSNLSY LNSLQNRTQP ATTENQSYTL KMLQSAGSHG 420 FSDF

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MFLSYNLESP TTGAFSSQVF DWMNDTKDTQ QGIKDREEPK MFSDFSFQPE SRPATNLQSS  60
SSMVSVEEPF KRERQAWDFN AEKAGVKSEF EPIEANTQSN ELNGAPKSDY LHSNQSSQYA  120
REQKSDDGFN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERSLDGQI TQIVYKGNHN  180
HHKPQSTRRS SSNSIQGSFY GISDQSVPTL SNPKVESVSL QEDSSTSIGE DEFEQNSPIS  240
NSVGAEDENE PEAKRWKGDN ANDQSYASSG GRIVKEPRIV VQTTSEIDIL DDGYRWRKYG  300
QKVVKGNPNP RSYYKCTSVG CPVRKHVERA SQDTRAVITT YEGKHNHDVP AARGSGNYSN  360
ASRPAADNNS NNVSMAVRPL ALPNHSNLSY LNSLQNRTQP ATTENQSYTL KMLQSAGSHG  420
FSDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein