PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015285.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 279aa    MW: 30920.5 Da    PI: 5.1897
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015285.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.7e-3084142259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY++eHnh+
  PCP015285.1  84 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTTLVITYSSEHNHS 142
                  69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDPTFFSSNS KQFLSDQEEN DNTTSSTPEN SSDSPPPSTN FSDYSKITTS TSSPKKSGRR  60
AIQKRVVSVP IKGDNSNSNT PPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ  120
VERSRVDPTT LVITYSSEHN HSWLASRNHH NNHNNSSSAA ATKRGPTKTE APEAQQPDHQ  180
DQDLDQDQDS RFADLNHESL IVNDEFVWFA DMETTSSRML ESPIFAESSS SVGSDSGDKA  240
AMVFPMGEED ESLFADLGEL PECTFVFRYR GVGPQAQIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.19e-65WRKY family protein