PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015231.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 462aa    MW: 51857.7 Da    PI: 8.3149
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015231.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.44.6e-31108212199
                  EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                  f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F +  g+  + +l
  PCP015231.1 108 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFLRGlGEvGKDRL 205
                  89****************************66677899************************************************966688899999 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  ++ ++r+
  PCP015231.1 206 FIDWRRR 212
                  9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MNFEAAAARA RDAGFSTEDD QNMVRGKLPF SYSSSPSSSS SSPHYNKTTG VATLVPSSAV  60
SRSRSWHDGR GSPDTKLELM DSAPRENNED GGAQREENPI PIEREHMFDK VVTPSDVGKL  120
NRLVIPKQHA EKYFPLDSSS NEKGLLLNFE DRNGKPWRFR YSYWNSSQSY VMTKGWSRFV  180
KEKKLDAGDI VSFLRGLGEV GKDRLFIDWR RRPDAPYPNH HHHHHALHPH YQPNFAIPHQ  240
HQYSWNPHRP VPWSPLLMRP PGVVVTPDHL SQQQINYGVN MHHPYRNTGT SGGGSGSYGY  300
GKVVNSTGPI YYLRSASSAA PPQFHEQGDS GLIEFQQHQQ VQLGRVHESN MVLESVPVVH  360
GKAAAKKLRL FGVNMECPIS ESDHECDILS STTLSSSQYH HHHAHHQLSP PSQPPPLQLR  420
LYDGMPLHHQ TMPSTTTTST TTDFLNMRGK ASPSSMSLDF DV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-65B3 family protein