PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP015205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 27327.3 Da PI: 5.395 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.9 | 1.2e-29 | 51 | 109 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ +p+++++tY +Hnh+ PCP015205.1 51 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLNPTMLIVTYVCDHNHP 109 69*************************998****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEDSPSSASE DDTKVATPLP KKRRGVQKRV VSVPIGDVEG SKSKGEGHPP SDSWAWRKYG 60 QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRLNPTMLIV TYVCDHNHPM PTTKANQSSS 120 VTTTTTTTTA TSPTTESELP AKTEELTVFT SQVDLDLSDD SPTLLSDFGW FNDASSTVVL 180 ESPICLGNSS CMNNDVATRL KDEDEYLFAD LGELPEGSVI FRHRNRMVES DDQNARCSLS 240 AVVSYCSNTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 5e-68 | WRKY family protein |