PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015159.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 685aa MW: 75042.8 Da PI: 6.5114

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015159.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.4e-09	424	461	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + PCP015159.1 424 FEHflHPYPKDSDKILLARQTGLTRSQVSNWFINARVR 461 664459******************************88 PP
2	BELL	125.7	1.7e-40	286	357	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+a+ag gsakpYt++Al++iSrhFrcL dai++qi PCP015159.1 286 EKQELQSKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDAIAGSGSAKPYTAVALQTISRHFRCLHDAITGQI 357 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MSSYYTGSNN QKDATPMLYL REPLPSSYPE APLVSGNMMM YMNSGSYSDA LAGSSQQQNN 60 LGSSVGGSDS NQQQHDVLSH LGGAHVGEQG FSPWREGRNE MLVTHPMGTS SGILHGGHNL 120 QGQGLSLSLS TQIPSGMQMP SISYRNNNMG FASFLSPNAS VSSEGDGRNG SFRDEQPRNV 180 EYLQSGFPGG NPDSSKGDLS PYGMSSMART IPHNKYLKAA QQLLDEVVNV QKALKQHDRE 240 KNQSTHNHQK SFKEGDDGSK NDLESGVSTN PQEPASNSPC ELSHAEKQEL QSKLTKLLSM 300 LDEVDRRYKQ YYHQMQIVVS SFDAIAGSGS AKPYTAVALQ TISRHFRCLH DAITGQIRAT 360 RKSLGEQGAS GSMKGVGISR LRYVDQHLKQ QRALQQLGMM QQHAWRPQRG LPESSVSILR 420 AWLFEHFLHP YPKDSDKILL ARQTGLTRSQ VSNWFINARV RLWKPMVEEM YKEEAGDAEM 480 DSNSSSENTP QTKKGDNTRT MEDGVEGMQP SASSTAIEKF STGQFMDSKS DHFHDVEMAG 540 STGYANFQNV TRHEAEAEYG LVKLREGQRP GMDDSSLFSE ANVQTDRNSE RFTAAAAAYH 600 MPELGRFGSG SGVSLTLGLQ HCDGGGSLPI SSGTHHGFVS VRGDDLYNPA ASSVGSETAD 660 FECLDSGNQQ QHRFSSSHLL HDFVV

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MSSYYTGSNN QKDATPMLYL REPLPSSYPE APLVSGNMMM YMNSGSYSDA LAGSSQQQNN  60
LGSSVGGSDS NQQQHDVLSH LGGAHVGEQG FSPWREGRNE MLVTHPMGTS SGILHGGHNL  120
QGQGLSLSLS TQIPSGMQMP SISYRNNNMG FASFLSPNAS VSSEGDGRNG SFRDEQPRNV  180
EYLQSGFPGG NPDSSKGDLS PYGMSSMART IPHNKYLKAA QQLLDEVVNV QKALKQHDRE  240
KNQSTHNHQK SFKEGDDGSK NDLESGVSTN PQEPASNSPC ELSHAEKQEL QSKLTKLLSM  300
LDEVDRRYKQ YYHQMQIVVS SFDAIAGSGS AKPYTAVALQ TISRHFRCLH DAITGQIRAT  360
RKSLGEQGAS GSMKGVGISR LRYVDQHLKQ QRALQQLGMM QQHAWRPQRG LPESSVSILR  420
AWLFEHFLHP YPKDSDKILL ARQTGLTRSQ VSNWFINARV RLWKPMVEEM YKEEAGDAEM  480
DSNSSSENTP QTKKGDNTRT MEDGVEGMQP SASSTAIEKF STGQFMDSKS DHFHDVEMAG  540
STGYANFQNV TRHEAEAEYG LVKLREGQRP GMDDSSLFSE ANVQTDRNSE RFTAAAAAYH  600
MPELGRFGSG SGVSLTLGLQ HCDGGGSLPI SSGTHHGFVS VRGDDLYNPA ASSVGSETAD  660
FECLDSGNQQ QHRFSSSHLL HDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-132	TALE family protein