PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015091.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 471aa MW: 51879.5 Da PI: 4.954

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015091.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.3e-30	252	310	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers++dp+++++tY+g+H+h PCP015091.1 252 ADLWAWRKYGQKPIKGSPHPRNYYRCSTSkGCAARKHVERSTTDPNIFTVTYSGDHTHA 310 699*********************9988**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MADDWDLYAV VRGCKSTAQI TTNTTITAAT TAIVPTTPIH TPSDEFADDP FWDLLISSDE 60 LTDPLFSFPD LDDPKDNDLQ EQQQSFIPNP TTTNNNKNNN PSANNTTRGP NNIIPISPTI 120 SDFGGSSGSG QHHLQQHQQQ HHAQLQQQQL RQQQNQQHHL MPDHFTLGIP APAFRGIYGQ 180 QQPQMMQRGY QILQPQQPQN QQGFMRPGSM NPTYPLPRLP ITMPLHTPRS QRRRRTQQNK 240 KVCEVKAEDL TADLWAWRKY GQKPIKGSPH PRNYYRCSTS KGCAARKHVE RSTTDPNIFT 300 VTYSGDHTHA RPTHRNSLAG TSRNKQSAAS KSQKQPINND SGWAAVPNPS SPTTGQPLTV 360 QAEAVANKVN SDNSLDKENE EFDDDDEEMD ETEYGDEDED DDVVIPDMDL SDEIFMGQKE 420 LGSTSSSGSG SSSLVGASGD NFSDNVQSSL GYSWTDANCS SAAGATVGGG C

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MADDWDLYAV VRGCKSTAQI TTNTTITAAT TAIVPTTPIH TPSDEFADDP FWDLLISSDE  60
LTDPLFSFPD LDDPKDNDLQ EQQQSFIPNP TTTNNNKNNN PSANNTTRGP NNIIPISPTI  120
SDFGGSSGSG QHHLQQHQQQ HHAQLQQQQL RQQQNQQHHL MPDHFTLGIP APAFRGIYGQ  180
QQPQMMQRGY QILQPQQPQN QQGFMRPGSM NPTYPLPRLP ITMPLHTPRS QRRRRTQQNK  240
KVCEVKAEDL TADLWAWRKY GQKPIKGSPH PRNYYRCSTS KGCAARKHVE RSTTDPNIFT  300
VTYSGDHTHA RPTHRNSLAG TSRNKQSAAS KSQKQPINND SGWAAVPNPS SPTTGQPLTV  360
QAEAVANKVN SDNSLDKENE EFDDDDEEMD ETEYGDEDED DDVVIPDMDL SDEIFMGQKE  420
LGSTSSSGSG SSSLVGASGD NFSDNVQSSL GYSWTDANCS SAAGATVGGG C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	2e-43	WRKY family protein