PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015062.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 718aa MW: 81427.7 Da PI: 9.2804

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015062.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.1e-05	640	662	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y Cp+C+ F ++nL H++ H PCP015062.1 640 YICPKCPCEFVFSENLDAHMSEH 662 89*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MSVHPATPGR YCSSANNNNV FFFSVPTSPR RRTISSTYDD YPTPPMTPYH DANSKLGDFE 60 FDTSNSFNLG SVDNLTSQQV KDLFDRKQHE QRQTMAFADD LFCEGKVMPL APPLKLPPRL 120 GQNRYTNQSP TPSTPRSPSS GIKMRVLHRR LWNDDFDPFM VALQHVREEE KRGIAETEAR 180 DISDLNDQQN KQTGLQTPIH SPSVNSPSLL QSPTRLALPR GLEFARQVRL IGMELDHSER 240 PSRPKLEMEM PKNNIAQESG GPCKKQTKGQ KIRRLLLSAS FGKPDDEDKK RKDQTSEILK 300 KPTFLRRLSF KSGRSTSCKA EKRISNQLTK TTLVQFRPRL LLCMGYRARQ WGGLELDTIS 360 NGPKPHPKAL PEVNFVVKSP EVDSALLIYH RSWQRIPDVK FRCNYLIVVT FCPSLFMEKP 420 VYASIPFGLH FQCTSSDTPP ENPSENCRQR NHTVHFATTV TTSRSSGSND CPPSEKQPMQ 480 GMSQLTLSQF VAASRRTQVN ADRSRTIHLQ KNENSLLWFM QPSFSPASEV SQYCSYDPSS 540 HNQLKDPINL NTIEFRGNKE FARTPVSVSY PDSNFSFFTW NEPHLYMERS NLSELRSYKG 600 SNPSVNLLAP QQDKKVGSNP SLTNGIGTKR NLNKSKYAHY ICPKCPCEFV FSENLDAHMS 660 EHQRIEDQTN RMRSLDSASR LIGSECPLVH SQFISNLEHL AGQKLEASDP NSDNNGFE

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MSVHPATPGR YCSSANNNNV FFFSVPTSPR RRTISSTYDD YPTPPMTPYH DANSKLGDFE  60
FDTSNSFNLG SVDNLTSQQV KDLFDRKQHE QRQTMAFADD LFCEGKVMPL APPLKLPPRL  120
GQNRYTNQSP TPSTPRSPSS GIKMRVLHRR LWNDDFDPFM VALQHVREEE KRGIAETEAR  180
DISDLNDQQN KQTGLQTPIH SPSVNSPSLL QSPTRLALPR GLEFARQVRL IGMELDHSER  240
PSRPKLEMEM PKNNIAQESG GPCKKQTKGQ KIRRLLLSAS FGKPDDEDKK RKDQTSEILK  300
KPTFLRRLSF KSGRSTSCKA EKRISNQLTK TTLVQFRPRL LLCMGYRARQ WGGLELDTIS  360
NGPKPHPKAL PEVNFVVKSP EVDSALLIYH RSWQRIPDVK FRCNYLIVVT FCPSLFMEKP  420
VYASIPFGLH FQCTSSDTPP ENPSENCRQR NHTVHFATTV TTSRSSGSND CPPSEKQPMQ  480
GMSQLTLSQF VAASRRTQVN ADRSRTIHLQ KNENSLLWFM QPSFSPASEV SQYCSYDPSS  540
HNQLKDPINL NTIEFRGNKE FARTPVSVSY PDSNFSFFTW NEPHLYMERS NLSELRSYKG  600
SNPSVNLLAP QQDKKVGSNP SLTNGIGTKR NLNKSKYAHY ICPKCPCEFV FSENLDAHMS  660
EHQRIEDQTN RMRSLDSASR LIGSECPLVH SQFISNLEHL AGQKLEASDP NSDNNGFE