PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015037.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 275aa    MW: 30073.5 Da    PI: 7.1814
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015037.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022104126123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C + F ++  L  H++ H
  PCP015037.1 104 FPCNYCQRKFYSSQALGGHQNAH 126
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEPARNSETN IFSVAEVPPC PNTPLQDPKE TKQKLRVEED EEEMKDQEKQ KKPSIRIDLE  60
ASDSDSNRGF SFDNPELNLL ESLETGSSEG TTALVSDAAE PRVFPCNYCQ RKFYSSQALG  120
GHQNAHKRER TLAKRGQRVL GSHITASGAS FGYPYYSSLA SLPLHGGAFR ALDIQAHSMI  180
HKPSSVMPSS PIGFGSSYGH RSFRSRPIFD QQPTVGKLGV AAARGGGGAG RFDMAKSNMV  240
SQGNEEIGKC WLGNDGRFKS SSDQEEMKLD LSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.15e-41C2H2 family protein