PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015026.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 329aa    MW: 36692.1 Da    PI: 7.0263
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.31.6e-28170229159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh 
  PCP015026.1 170 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCVLVATYEGEHNHM 229
                  58***************************99****************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MDSTWVNTSL GLNLVPLCSA DDHQAPATMQ HELERDYAQF QGNNALVKEE VASHHDVLAE  60
ELNRISVENK KLTEMLTALC ENYNSLQSHV RELMITKQQQ NNSSDIYRKR KAGSEDYNNV  120
IGLISPGTNT DTCSISDDQE NSCKRPKEHT NLKISRVYVR TDASDTRLIV KDGYQWRKYG  180
QKVTRDNPSP RAYYKCSFAP SCPVKKKVQK SAENPCVLVA TYEGEHNHMH PESRAEVTLI  240
APVSPNQNQQ LITSTPLSVS PSMAKRSAPP TFSCDINRIS PNTTMCPQET EAAAFQQFLI  300
QQMASSLTKD PNFTTALAAA ISGRISDHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.22e-73WRKY family protein